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This organism can only be binned in the context of its binning project RifSed_csp1_19ft_3. Please contact the project owner (lavik17@gmail.com) to become a member and gain access.

CG_2015-01t_scaffold_23_prodigal-single_19

Organism: CG_PHAGE_32_16

RP 0 / 55 BSCG 0 / 51 ASCG 0 / 38
Location: 20391..21062

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase factor sigma-70 n=2 Tax=Clostridium acetobutylicum RepID=F0K7J3_CLOAE similarity UNIREF
DB: UNIREF100
  • Identity: 38.8
  • Coverage: 209.0
  • Bit_score: 137
  • Evalue 1.50e-29
RNA polymerase factor sigma-70 similarity KEGG
DB: KEGG
  • Identity: 38.8
  • Coverage: 209.0
  • Bit_score: 137
  • Evalue 4.20e-30
DNA-dependent RNA polymerase sigma subunit {ECO:0000313|EMBL:AAK81089.1}; TaxID=272562 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG; 5710 / VKM B-1787).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 38.8
  • Coverage: 209.0
  • Bit_score: 136
  • Evalue 4.60e-29

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Taxonomy

Clostridium acetobutylicum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 672
GTGACAATTAATGAAATATCTAGTGATGACATTGAACAAAACAACCTATATATTTTAAAATTAGTTCGAAAAGCAAAAAATGGGGACCAAGAATCGTTTGATAAATTATTAAATCATTTAGACCCACATATTAAAAACATGTGTCACAAATATTATTTACCTGGATTTGACAAAGAAGATATTTTACAGATTGCTAGAATAACTTTGTATAGAGCAGTTCAAGATTTTTCAGATGATAAAAATACAACATTTGAGCATTTTGCATTAAAAATATGTATTAGAAAAAGATTAATAACAGAAATATATAGGACTCAAAGACAAAAGCATCTCCCTTTAAATACAGCAAAATCTTTAGATACTCCATTAGGGGGGGATTATGAAAACGATAATTCATCAACCATGTGTGATTATATTGTTGATGAAGAGGGGGATCCTTTAAACAAGCTTCTTCACGAAGAAGAGATAGATGAATTAAGATTAGCTTTATATGGTAAGTTAACAGATTTAGAGGCTTCTGTGTTAGAGGCTAGAGAAGAAGAAAAAACATATAAAGGAATTGCAAGAAAGCTTGACATATCGACAAAATGTGTTGATAATTCGTTAGGTAGGGTTAGGAAAAAGTTAAAATCAGTTTGTGGTGGTTTATATGATTTTAATTTCGAAGATGATTAG
PROTEIN sequence
Length: 224
VTINEISSDDIEQNNLYILKLVRKAKNGDQESFDKLLNHLDPHIKNMCHKYYLPGFDKEDILQIARITLYRAVQDFSDDKNTTFEHFALKICIRKRLITEIYRTQRQKHLPLNTAKSLDTPLGGDYENDNSSTMCDYIVDEEGDPLNKLLHEEEIDELRLALYGKLTDLEASVLEAREEEKTYKGIARKLDISTKCVDNSLGRVRKKLKSVCGGLYDFNFEDD*