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cn_combo_scaffold_3727_2

Organism: CN-SCN_Erythrobacter_14x

partial RP 39 / 55 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(488..2005)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase factor sigma-54 (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 64.4
  • Coverage: 509.0
  • Bit_score: 602
  • Evalue 1.40e-169
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002EC8D79 similarity UNIREF
DB: UNIREF100
  • Identity: 72.1
  • Coverage: 513.0
  • Bit_score: 698
  • Evalue 3.80e-198
Tax=BJP_08E140C01_10KDA_Sphingomonadales_62_47 similarity UNIPROT
DB: UniProtKB
  • Identity: 74.2
  • Coverage: 512.0
  • Bit_score: 708
  • Evalue 8.80e-201

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Taxonomy

BJP_08E140C01_10KDA_Sphingomonadales_62_47 → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1518
ATGGCGCTCGGCCCTCGCCTTGATCTTCGCCAATCGCAATCGCTGGTGATGACGCCGCAATTGCAGCAGGCAATCCGGCTGCTGGCGGCGTCCAATCTGGAAATCGAAACCTTCATTGCCGAGGCGCTCGAGACCAATCCGCTGCTTGAGGCCGGCGATGTGCGGCAGGTAGCGGCTGCTCCCACCGGCGATGCGCCTGAACTGCCGCCCGAAGCGCCCACCGCCGATGAATTGATGATGCGCGGGCGCGGTGAGGCCGATGCCCCGCTCGATCTCGGCGGCGCGGCGCTTGACCGCGATGTCGATACCGGCGACGGGGCACGCTCGCTCAGGGACGCCGAATGGGGCACAAGCAGCGGCGGCGCGGGCGGCGGGGACGAGGATTTCAGCGATTTTTCCGAGCGGCAGGCAGCCGAAGTCACTTTGCGCGAACACTTGGAGGCACAGGTCGGCGCGCTGGCCCGCAGCGCCGAGGAGAATTTCGCCGCGCACCACATCATCGGCCTGCTCGATGATGCGGGCTATCTGCCCTTCCCTCTGGACGAAATTGCGGCTGATCTGGGCATTGATGAACCCGCCGCCGAAGCCGCGCTGATGCTGGTCCAATCGCTTGATCCGGTTGGCGTGGGGGCGCGCGATCTGGCGGAATGCATCGCTATCCAGGCGCGCGAGGCGGATCGCTATGATCCCTGCATGGCCGCGCTCATCGCCAATCTCGAACTGCTGGCGCGCGGCGAGGTGGAGCGCTTGAAACGCCTGTGCCGGGTGGATGACGAGGATTTCGCTGATATGCTGCGCGAACTTCGCAGCTATGATCCCAAGCCCGGCCTTACCTTTGCGCCCGCTGCCGCGAGCGCGGTGGTGCCCGATATTCTCGTCACCGATAACGGGAAAGGCGGCTGGGACATTGCCTTGAACGAGGAAACCCTGCCGCGCCTCGTTGTTAATCGTTCCTATGCGACCGAGATTGCCGTGGGCGGCGCGAGCGATCCGGCGGCGAATGCCTGGCTGAAGGAGAAGCTGGCCGATGCCCACTGGCTGATCCGCGCCCTCGATCAACGCCAGCGCACCATCCTCAAAACCGCCGCTGAAATTGTTCGCCAGCAGGACGGGTTCTTCCGGCGCGGGGTTTCAGACCTGCGCCCGCTTACCCTGCGCGAGGTGGCCGAGAAGGTCGATCTGCACGAAAGCACCATCAGCCGGGTCACCAGCAACAAATATCTCGCCTGTCCGCGCGGCACCTTTGAACTCAAATTCTTCTTCACCAGCGGAGTGGGGCGCACCGGGGAAGGCACAGATGGCGAAGGGGCATCCTCGGCTGCGATCAAAGCGCGAATCAAGGCGCTGATCGATGCAGAAGATGTAAAAAGCATTCTGTCTGATCAGACGCTGGCCGAAATGCTCCAGAACGAAGGCTTTGATCTCGCCCGGCGGACAGTGGCCAAATATCGCGAAGCCATCGGTCTTGGCTCCAGTGCCGAAAGGCGACGAGCAAAGAAGCTGGCCGGCCTCACATAG
PROTEIN sequence
Length: 506
MALGPRLDLRQSQSLVMTPQLQQAIRLLAASNLEIETFIAEALETNPLLEAGDVRQVAAAPTGDAPELPPEAPTADELMMRGRGEADAPLDLGGAALDRDVDTGDGARSLRDAEWGTSSGGAGGGDEDFSDFSERQAAEVTLREHLEAQVGALARSAEENFAAHHIIGLLDDAGYLPFPLDEIAADLGIDEPAAEAALMLVQSLDPVGVGARDLAECIAIQAREADRYDPCMAALIANLELLARGEVERLKRLCRVDDEDFADMLRELRSYDPKPGLTFAPAAASAVVPDILVTDNGKGGWDIALNEETLPRLVVNRSYATEIAVGGASDPAANAWLKEKLADAHWLIRALDQRQRTILKTAAEIVRQQDGFFRRGVSDLRPLTLREVAEKVDLHESTISRVTSNKYLACPRGTFELKFFFTSGVGRTGEGTDGEGASSAAIKARIKALIDAEDVKSILSDQTLAEMLQNEGFDLARRTVAKYREAIGLGSSAERRRAKKLAGLT*