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cn_combo_scaffold_4454_1

Organism: CN-SCN_Erythrobacter_14x

partial RP 39 / 55 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 2..1123

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase su similarity UNIPROT
DB: UniProtKB
  • Identity: 90.1
  • Coverage: 374.0
  • Bit_score: 675
  • Evalue 4.60e-191
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 85.3
  • Coverage: 375.0
  • Bit_score: 630
  • Evalue 3.50e-178
DNA-directed RNA polymerase subunit beta n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI000310ABBC similarity UNIREF
DB: UNIREF100
  • Identity: 93.8
  • Coverage: 373.0
  • Bit_score: 699
  • Evalue 2.10e-198

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Taxonomy

Erythrobacter litoralis → Erythrobacter → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1122
CGTCACGAGTGGTTCAAGTTCGCGGTCGCGGACGACAACCGCCAGGCGCAGATCGAGGCGGTGAAGTCGCAGTATGACGAAGCCGTCAAGCTGATCGATGCCAAGTTCGAGGACCGCAAGGAAAAGCTCGAACGCGGCGATGAACTCGCTCCGGGCGTGCTCAAGATGGTCAAGGTCTTTGTCGCGGTGAAGCGCAAGCTGCAGCCGGGTGACAAGATGGCGGGCCGTCACGGCAACAAGGGTGTGATCTCGCGGATCCTGCCGGTGGAAGACATGCCTTTCCTTGAGGACGGCACGCCGGTTGATCTGGTGCTGAACCCGCTGGGCGTGCCTTCGCGCATGAACGTGGGTCAGATCTTTGAAACCCACCTCGGCTTTGCCGCGCGCGGGCTCGGCCATGAAATCAAGAACAAGCTTGATGAATGGCGCCGCGCCAACCCCGATGCCGCGCGCGATTATGCCAATGTGGCGCCGCCTGCAGCAGTGGTGGACCGCCTGAAAGACATCTACGGCGAACAGTATCACGAAGACTTGGACAGCCGCTCGACTGCGGAAATCGTCGAGCTCGCTGGCAATCTTGCTGCAGGCGTCCCGATGGGTACACCGGTGTTCGATGGTGCGCGCGAGGCGGACGTGTCGGAAATGCTGGTCAAGGCCGGGATCGATTCCTCTGGTCAGTCCACGCTTTATGATGGCCGCACCGGCGAAGCCTTTGACCGCAAGGTGACTGTGGGCATTATCTATATGCTCAAGCTTCACCACTTGGTTGACGACAAGATCCACGCGCGTTCGATCGGGCCCTACAGCCTCGTCACCCAGCAGCCGCTGGGCGGTAAGGCGCAGTTCGGCGGCCAGCGCTTCGGGGAAATGGAGGTCTGGGCGCTGCAAGCCTATGGCGCGGCCTACACCTTGCAGGAAATGCTCACGGTGAAGTCCGACGACGTGGTTGGCCGCACCAAGGTCTATGAAGCGATCGTCAAGGGTGACGATACCTTCGAGGCCGGCATTCCGGAGAGCTTCAACGTGCTTGTGAAGGAAATGCGCAGCTTGGGCCTCAATGTCGAGTTGAAGTCGATCCTCGATGAGGACGATGACGGCGAGATGCTGGAGGCAGCAGAGTAA
PROTEIN sequence
Length: 374
RHEWFKFAVADDNRQAQIEAVKSQYDEAVKLIDAKFEDRKEKLERGDELAPGVLKMVKVFVAVKRKLQPGDKMAGRHGNKGVISRILPVEDMPFLEDGTPVDLVLNPLGVPSRMNVGQIFETHLGFAARGLGHEIKNKLDEWRRANPDAARDYANVAPPAAVVDRLKDIYGEQYHEDLDSRSTAEIVELAGNLAAGVPMGTPVFDGAREADVSEMLVKAGIDSSGQSTLYDGRTGEAFDRKVTVGIIYMLKLHHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALQAYGAAYTLQEMLTVKSDDVVGRTKVYEAIVKGDDTFEAGIPESFNVLVKEMRSLGLNVELKSILDEDDDGEMLEAAE*