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cn_combo_scaffold_354_97

Organism: CN-SCN_Acidobacteria_32xOld

near complete RP 52 / 55 MC: 3 BSCG 48 / 51 MC: 1 ASCG 12 / 38
Location: comp(108518..109495)

Top 3 Functional Annotations

Value Algorithm Source
type II secretion system protein E; K02283 pilus assembly protein CpaF id=12555010 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 326.0
  • Bit_score: 630
  • Evalue 8.20e-178
flpF2; Pilus assembly protein, ATPase; K02283 pilus assembly protein CpaF Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 80.9
  • Coverage: 320.0
  • Bit_score: 507
  • Evalue 1.50e-140
type II secretion system protein E similarity KEGG
DB: KEGG
  • Identity: 47.5
  • Coverage: 297.0
  • Bit_score: 254
  • Evalue 3.40e-65

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Taxonomy

R_Acidobacteria_61_28 → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 978
GTGAGCAGTCTCGACCGCATCCTGCCGTTCCTCAGGCCCATCGAGGACCTGCTGGTCGATCCCGAGGTCACCGAAGTGATGGTCAACGCCGGCGGCCGGCGCGTCTTCGTGGAGCGTGCCGGAGTGGTCGAACCCGTTCCCGATCGAACGCTCGAGGTCAGGAATCTCGCCGTCGCCATCAAGAACATTGCGCGCGCCTGTGGAGACGAGATCTCCGACCATCAGCCCGTGCTCGATGCCAGGCTCGAAGACGGCTCGCGCGTAGCCGCCATGTTCCCACCGTGTTCGGTCGACGGACCCACGCTCACGGTGCGGAAGTTCACGCATCGGTACTCGCTGGACGAACTCGTCTCGGTCGGGACGCTGACACCGGAGCTGGCGCAGGCGCTGCGCCGCGCGGTCGCGGACCGACGCAACATCCTCATCTCCGGCGGAACCGGGACGGGAAAGACGACGCTCCTGAATGCGCTGGCGGCGACGATTCCGGCAAGCGACCGGATCGTGCTGATTGAGGAGACGTCCGAGATCCTGATCGACAAGCCGAATCTCGTCCGGTTCGAGGCGAGACGGGCGCAAGCGCCGCTCGGCCAGGAAGCACCCCTTCCGGCCGTGACCATCTCGGACCTGCTGCGAGCCACGCTCCGGCACCGGCCCGACCGGATCCTCGTCGGTGAGGTGCGCGGTCCGGAAGCGTTCGACCTCCTGCAAGGGCTCAACACCGGCCATCTCGGGAGCCTCAGTACGATCCACGCGAACTCCGCGGAGCAGGCACTCACGCGGCTCGCGCACTGCGTGCTGACCGCGAACGTCGGTCTGCCACATCGCAGCACACGGGAGGCCATCGCGCTCGCGATCCACCTGGTCGTCCACATCGCGCGCCAAGAGGGGAGGCGGGCGGTCAGCGAAGTCGTGGGTCTCCGCCGGTACGACGCCCAGAACGAGCAGTTCGTGCTGGAGGCGTGGCCGACCGGCGTGTGA
PROTEIN sequence
Length: 326
VSSLDRILPFLRPIEDLLVDPEVTEVMVNAGGRRVFVERAGVVEPVPDRTLEVRNLAVAIKNIARACGDEISDHQPVLDARLEDGSRVAAMFPPCSVDGPTLTVRKFTHRYSLDELVSVGTLTPELAQALRRAVADRRNILISGGTGTGKTTLLNALAATIPASDRIVLIEETSEILIDKPNLVRFEARRAQAPLGQEAPLPAVTISDLLRATLRHRPDRILVGEVRGPEAFDLLQGLNTGHLGSLSTIHANSAEQALTRLAHCVLTANVGLPHRSTREAIALAIHLVVHIARQEGRRAVSEVVGLRRYDAQNEQFVLEAWPTGV*