ggKbase home page

cn_combo_scaffold_354_103

Organism: CN-SCN_Acidobacteria_32xOld

near complete RP 52 / 55 MC: 3 BSCG 48 / 51 MC: 1 ASCG 12 / 38
Location: comp(114486..115187)

Top 3 Functional Annotations

Value Algorithm Source
putative conjugal transfer protein; K03200 type IV secretion system protein VirB5 id=12555016 bin=CNBR_ACIDO species=Acidobacterium capsulatum genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 234.0
  • Bit_score: 451
  • Evalue 4.90e-124
putative conjugal transfer protein; K03200 type IV secretion system protein VirB5 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 78.4
  • Coverage: 232.0
  • Bit_score: 374
  • Evalue 1.10e-100
conjugal transfer protein similarity KEGG
DB: KEGG
  • Identity: 38.3
  • Coverage: 227.0
  • Bit_score: 162
  • Evalue 1.30e-37

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 702
ATGCCAGCAACCGTCGGCGACATCGTCCCGAAGTCTCTCGAGAGTGCGAAGCGGCAGTTCGTGGAGGTGTACGGATCGGCGCTGGTCCTGAACACGTACCTGAAGATCGCGCTCGTCCTCGTCTCCCTCGTCGCGCTTGGCCTGATCGGGCTCAACGTGTTCACAATGACGCGCTACGCGCAGGTCAAGCCGCTCGTCATTCGTATCGACGAGGTCGGTCGGGCCGAGGCCGTGCAGTACGACGCGGCAGGGTATGCGCCACGGCCGCCGGAACTGCGCTACTTCCTGACGCAGTTCGTCGTGAAGCACTTCAGTCGGATCAGGGCCACCGTCCAGCGCGAGTACCCCGATTCGCTGCTGTTCCTGGAGCCGGCGCTCGCGGACGCGACCATCGCGCAGAACGACCAGAGCCGCGCGCTCCAGACGTTTGTCACCACCGCCTCGAGCGACGAGATTGACGTCATCGTTCAGAACGTCAGCCTGTCCGAGTTGACGACCGTACCCTACAAGGCCACGGTCGCCTTTCAGAAGGTCTTCTACGCGCCGGGTACGCGCCACGAGCGTGCGCGAGAAACCCACGTGGCCCAGATCGATTTCGTGCTTCGCGACCGTGTGCCGAATGAGTTTGTCCGGGTGAATCCGCTCGGGCTCCAGATTGCCTACTTCCGGGTCGACCAGGCGTTTCAGGAGACGCGGCCGTGA
PROTEIN sequence
Length: 234
MPATVGDIVPKSLESAKRQFVEVYGSALVLNTYLKIALVLVSLVALGLIGLNVFTMTRYAQVKPLVIRIDEVGRAEAVQYDAAGYAPRPPELRYFLTQFVVKHFSRIRATVQREYPDSLLFLEPALADATIAQNDQSRALQTFVTTASSDEIDVIVQNVSLSELTTVPYKATVAFQKVFYAPGTRHERARETHVAQIDFVLRDRVPNEFVRVNPLGLQIAYFRVDQAFQETRP*