ggKbase home page

cn_combo_scaffold_354_108

Organism: CN-SCN_Acidobacteria_32xOld

near complete RP 52 / 55 MC: 3 BSCG 48 / 51 MC: 1 ASCG 12 / 38
Location: comp(117842..119077)

Top 3 Functional Annotations

Value Algorithm Source
putative conjugal transfer protein, TrbI family; K03195 type IV secretion system protein VirB10 id=12555021 bin=CNBR_ACIDO species=Acidobacterium capsulatum genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 412.0
  • Bit_score: 806
  • Evalue 1.00e-230
putative conjugal transfer protein, TrbI family; K03195 type IV secretion system protein VirB10 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 57.1
  • Coverage: 415.0
  • Bit_score: 458
  • Evalue 9.80e-126
conjugal transfer protein, TrbI family similarity KEGG
DB: KEGG
  • Identity: 33.6
  • Coverage: 447.0
  • Bit_score: 204
  • Evalue 6.70e-50

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1236
ATGGCTGAACACACCGACGCACCGGAGACCGCGGTCGTCACCGATCGGCGTGTGGCTCCCCGGGGTGTGCTGCCGCGGAACCTGCAGACGTGGCTCATGGCGGGACTCGCGGGCGGCATTGTTCTGGTGATCCTGCTGGTCGGGCAACCGGATCCGCCGACCGGCGCGTCCAGAGCGTCGGTGGTTCCCCAGGTTCCGAACGCGGACAGAGTTCGCGACTATCAGGACCGACTACGGGCCATGGAAGCCCAGGCCCTCGGTGAGCTGCAGGCCGCCGAGCAGGCGGCCGCCCGCGTGCCGCCCCTGGCTGTCGGCGAGCCGGCCCGGGCCACGCCTCCGGATCCGGCGGCGGCCGACAGGCATCGACGCGAATACGAAAGCCTGTTCGCCAGCAACGTCGCCGTCAGCAGACGACCCGAGGGTGATCGGCCCGACGTCGGACTCGCCAGAACGTCGAGCGGCATTGCGGACACCGGTATTCCGTCCGTTGACGATGTTGCTGACGCGGTCGTGCGTGCCGCGGGCCGCGCCGGCACATCTGTGTCGGCCACGTCGCGGCCGGTCGTTGACGCCGAAGACCAGACGCCGAGGGGAGGGGTAGGGCAGGAGCGCACGCCAGCCGGCACCGGACCCATTCCGGCTGCGGCGTCGATGAATCTCCTCCTCGAAGGCACGCTGATCGATACGGTTCTGACGAATCGGCTCGACGGGAGCGTTGCCGCGCCGGTGAATCTGCTCGTGACGAACCCGGTGTACTCGCACAGCGGGCAGCAGGTCGTGATTCCCGCCGGTGCCCGGATTCTGGGTGAGACACGGCCGGTGCAGTCGCTGGGGGAGTCCCGTCTCGCTGTCGCGTTGCATCGGCTCGTCCAGCCCGACGGCCGCACGTATCGACTCGATCAGTTCCTGGGGCTGAACCAGGTCGGCGACGCCGGGCTTCGCGACAAGGTGAATCAACACTTCTGGGCGACGTTCGGGGCGGCCGGAGCCGTCGGGCTCATCGGCGGTCTCGCGCAATGGTTCGGCACGTCCGGCCTCGCCCGCGGTGACGGTGACGGCACCGTCGTCATTGCCGGCGGCGCGACGGATTCCACGGCGCAGGCCAGTGCGCAGGTGATGAACCGGTTCCTGAACCGGCTGCCCACCGTGACGATCCGCGAAGGTCATCGCGTCAAGGTTTACATCACGCGAGACCTCGAGCTGCCCGCATACCCGCGTGTCCGGACCGGTCCCTGA
PROTEIN sequence
Length: 412
MAEHTDAPETAVVTDRRVAPRGVLPRNLQTWLMAGLAGGIVLVILLVGQPDPPTGASRASVVPQVPNADRVRDYQDRLRAMEAQALGELQAAEQAAARVPPLAVGEPARATPPDPAAADRHRREYESLFASNVAVSRRPEGDRPDVGLARTSSGIADTGIPSVDDVADAVVRAAGRAGTSVSATSRPVVDAEDQTPRGGVGQERTPAGTGPIPAAASMNLLLEGTLIDTVLTNRLDGSVAAPVNLLVTNPVYSHSGQQVVIPAGARILGETRPVQSLGESRLAVALHRLVQPDGRTYRLDQFLGLNQVGDAGLRDKVNQHFWATFGAAGAVGLIGGLAQWFGTSGLARGDGDGTVVIAGGATDSTAQASAQVMNRFLNRLPTVTIREGHRVKVYITRDLELPAYPRVRTGP*