ggKbase home page

cn_combo_scaffold_354_110

Organism: CN-SCN_Acidobacteria_32xOld

near complete RP 52 / 55 MC: 3 BSCG 48 / 51 MC: 1 ASCG 12 / 38
Location: comp(119880..122303)

Top 3 Functional Annotations

Value Algorithm Source
type IV secretion/conjugal transfer ATPase, VirB4 family; K03199 type IV secretion system protein VirB4 id=12555023 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 808.0
  • Bit_score: 1610
  • Evalue 0.0
type IV secretion/conjugal transfer ATPase, VirB4 family; K03199 type IV secretion system protein VirB4 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 74.3
  • Coverage: 805.0
  • Bit_score: 1218
  • Evalue 0.0
type IV secretion/conjugal transfer ATPase similarity KEGG
DB: KEGG
  • Identity: 37.9
  • Coverage: 811.0
  • Bit_score: 540
  • Evalue 7.80e-151

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 2424
ATGTACCTGCCACGTCTTCTTCGGGACTACGGCGAGGCCGGCGCCGTGAACACGCTGCTGGCGCCCTGGGGGTTCGTCGATGACGAGACGTTCCTGACCAAGAGCGGCCACGTCGGCATCGTCTATGCCCTGCGCGGCGTCGATGGCGAGGCCTTGCCCCATCCGCAGCGTCGGGCCCTCACGCACCGGTTCGAGGCGGCCCTGCGTGTGCTCGACGAGCACTGCCGTGTCTCTCAATACGTGATCAAGCAGGCCGTGCCGCCCTTCGCCGCGTCCGAGTGCTCCCGACCGGTGGCGAACGACGCCATTCAACGGCGGGTGGCGTACCTGAACGGACGACTGGGCACGCTCTCCCAGGTCGGGCTGTTCCTGGTCCTGCTGTACGAGGCTCCGCTCCCATCCCGCCGCAGCACTGCCCTCCGCGACGTCTGGTGTGCACCGCGGCAGGGCCTGCGCACCTGGTTGTCACCGTCAGCCGGCGCCAGGGTGGTCGAGGCGGACCTGGAACGGGCGGTCTCGACACTCCACCACAAGGCGCAGGCGTTCGAGGTGCAGCTGACTGACTTCGGGCTTCAGAGACTGCCCAAGACACGGGCGTTCCGCTTCTTCCGTCAGCTCCTGAACTACGACCCCGTGGTGGTCGATGCGGCGCGGCTGTCGCACGACGTGCACCTGGACTACTTCATGGCGGACTCCCCGATCGAGTGCCATCGCGACCACCTCACGGTCGGCCGCCAGGGGGTCAAGGTCTTGACGATGAAGGAGCCACCGAGCCAGACGTTTGCGCAGGTCATGGCGGACCTCGTGGCCGTGCCCGGGGAGTTCATCGCGTGTCTGGAATGGCAGCGGACGGCCAGTGACCGGATGCGGCGCGACATTCAGGCGCGGCGCCGACACTTCTTCAACAAACGGGTGTCGTTCGTGAACTACGTCGCACCCGACACGCGGCCTGAGGACATGCTGGTCGACGACTCGGCCAACATGGTGGTGCGTCAGCTCGGCGATGCCATGACCGAGATCGAGGCCCATGGGCACTTCTTCGGCTCGTGTTCCCTGACCCTCGCGCTGCACGGTCCGGATTCGCGGGCGCTGGAGCACCAGGCGGCCGAGGCGATGAAGATGCTGGCCGTGCACGACGGTAGCCTCTTCGAGGAGAGCTACAACCTGCTGAATGCGTGGCTGGGCATGGTGCCCGGGAACGGCGCGTTCAACCTTCGCCGGCTCGCTTTGCTCGAGACCAACGTCGCCGACCTGAGCTTTCTGTGTGCGCCGGATCCCGGCGAGCCGATCAGTCCGCACTTGCAGAAGGAGGCCTTGGCCATCTTCGAGACGCCGGCCGGAGCGCCGTACGCGTTCAACCCGCACGTGCAGGACGTCGGTCACACGCTTGTCCTCGGCGCCACGGGCAGCGGCAAGAGTTTCCTCCTGAACTTCCTCGTCACCCACGCGCAGAAGTACGACCCGGTGACCGTCATCCTCGACCTCGGCCACAGTTACCGCAAGCTCGCAACGCTGCTGCAGGGCCAGTACCTCGAGGTCGGCCTTCGCAACGAGGCCGTGACGATCAACCCCTTCGCGCTGGAGGCGTCATCGGAGCACCTGCATTTTCTGCACGCCTTCGTGCGCGTGCTGCTCGAGGGCAACGACAACTATCGGCTGAGTGATCTCGAGGACCGCGAGGTCTACGAGGCGATCGAGAACCTCTACGTGCTCGACCGCGCGCAGCGGCGATTGTTCACGTTGGCCAACCTGTTGCCTCGTGCCCTGGCGGCTCGTCTTCACAAGTGGGTCGAGGGCGGACGCTATGCCGCCCTCTTCGACAACGTGGACGACACGCTGACAGTCAATCGCCTGCAGGTGTTCGATTTCGAGGCGATGCGCGCCTATCCGGTGCTGCTCGAGCCGCTGCTGTTCTATGTTCTGCATCGGGTGACGGCCCGCATCATGGAGCCGGCCGAAGCGGCCACGCTGAAGCTGTGTGTGATGGACGAGGCGTGGCGATTCATACAGCATCCCACGCTCCGCGCCTACGTTCAGGAAGCCCTCAAGACCTGGCGCAAGCGCAACGCGATGATGATGCTGGCGACGCAGGCGGCCGACGACTTCGCGTCCGCCGACCTGCTTCGCACCGTCATCGAGAGCTGTCCGACGAAGCTGCTGCTCGCGAACCCGTCGCTCGACACACAGCAGTACGTGGACCTCTTCCATCTGAATCCGATGGAACTGGAACTCCTGACGAATCTCATTCCGCGCCAGCAGCTCCTGCTCAAGCGAGCGTCGCTGGCGAAGGTGCTCTCGCTGACGGTGGATCCGAAGAGCTACTGGATCTACACCAACACGCCCGTCGACAACGAACGCGTGGACGAGAGTGTCCTCGCGCATGGATTCGATGCGGGGCTGGCACGCCTCGCGGAGTCGGCCTGA
PROTEIN sequence
Length: 808
MYLPRLLRDYGEAGAVNTLLAPWGFVDDETFLTKSGHVGIVYALRGVDGEALPHPQRRALTHRFEAALRVLDEHCRVSQYVIKQAVPPFAASECSRPVANDAIQRRVAYLNGRLGTLSQVGLFLVLLYEAPLPSRRSTALRDVWCAPRQGLRTWLSPSAGARVVEADLERAVSTLHHKAQAFEVQLTDFGLQRLPKTRAFRFFRQLLNYDPVVVDAARLSHDVHLDYFMADSPIECHRDHLTVGRQGVKVLTMKEPPSQTFAQVMADLVAVPGEFIACLEWQRTASDRMRRDIQARRRHFFNKRVSFVNYVAPDTRPEDMLVDDSANMVVRQLGDAMTEIEAHGHFFGSCSLTLALHGPDSRALEHQAAEAMKMLAVHDGSLFEESYNLLNAWLGMVPGNGAFNLRRLALLETNVADLSFLCAPDPGEPISPHLQKEALAIFETPAGAPYAFNPHVQDVGHTLVLGATGSGKSFLLNFLVTHAQKYDPVTVILDLGHSYRKLATLLQGQYLEVGLRNEAVTINPFALEASSEHLHFLHAFVRVLLEGNDNYRLSDLEDREVYEAIENLYVLDRAQRRLFTLANLLPRALAARLHKWVEGGRYAALFDNVDDTLTVNRLQVFDFEAMRAYPVLLEPLLFYVLHRVTARIMEPAEAATLKLCVMDEAWRFIQHPTLRAYVQEALKTWRKRNAMMMLATQAADDFASADLLRTVIESCPTKLLLANPSLDTQQYVDLFHLNPMELELLTNLIPRQQLLLKRASLAKVLSLTVDPKSYWIYTNTPVDNERVDESVLAHGFDAGLARLAESA*