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cn_combo_scaffold_1049_26

Organism: CN-SCN_Acidobacteria_32xOld

near complete RP 52 / 55 MC: 3 BSCG 48 / 51 MC: 1 ASCG 12 / 38
Location: comp(31067..31600)

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 factor id=12556267 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Verrucomicrobia tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 178.0
  • Bit_score: 350
  • Evalue 1.20e-93
ECF subfamily RNA polymerase sigma-24 factor Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 62.8
  • Coverage: 180.0
  • Bit_score: 216
  • Evalue 3.70e-53
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 53.8
  • Coverage: 173.0
  • Bit_score: 173
  • Evalue 4.20e-41

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Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 534
ATGAGCGACGTCGACCGGTTTGAGGCGTTCGTACTTCGGTTCCAGGACATGGTCTACGCCACCGCATTCCGGCTGCTCGGCCGTCCCGCAGATGCCGAGGACGTGGCGCAGACCGTCTTCCTCCGGGCCTTCGAGCGATTCGATCAGGTGGGCGAGAGCCCGGCGGCGCCGGGATGGCTGAAGACCGTCACGACGAACCTCTGCCTGAACCATCTCGCGCGGCATCGCGCGCGCTGGCGGCTGTTCAGCGAGATGGGGCGCGCGGACGAGGACGGCCAGGTCGAGGCATTCGAGTCGACGCTGGCCGCGCTGCCGCTGACCGACACGATTGACGAAACCGACGCGCAGGCGGCGCTCGAGGCGGCGCTGGCCGCACTGCCCGCGCACCAGCGCGTGCCGCTCGTGCTGTTCCACTACGAAGAGAAGAGCTACCAGGACATTGCGGCCCTGCTCGGCGTGTCGCTGGGCAAGGTGAAGACGGACATCCATCGGGCCCGCGCGGCCCTGCGTCGTGCGGTGACACGCCATGCATGA
PROTEIN sequence
Length: 178
MSDVDRFEAFVLRFQDMVYATAFRLLGRPADAEDVAQTVFLRAFERFDQVGESPAAPGWLKTVTTNLCLNHLARHRARWRLFSEMGRADEDGQVEAFESTLAALPLTDTIDETDAQAALEAALAALPAHQRVPLVLFHYEEKSYQDIAALLGVSLGKVKTDIHRARAALRRAVTRHA*