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CN-SCN_Acidovorax_108x

CN-SCN_Burkholderiales_65_107
In projects: CN-SCN

Consensus taxonomy: Burkholderiales  →  Betaproteobacteria  →  Proteobacteria  →  Bacteria

Metagenomic Context

Parent: CN-SCN_Unknown

Properties

Avg. coverage: 107.44 Longest contig: 184.61 Kbp Bin length: 5.13 Mbp GC content: 64.63 %
Contigs count: 190 Features count: 4875 rRNAs count: 0 tRNAs count: 41

Genome completeness

partial RP 43 / 55 MC: 3 BSCG 39 / 51 MC: 12 ASCG 10 / 38 MC: 2

Description

Partial 43

Displaying items 1-50 of 190 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
cn_combo_scaffold_1232 ACV108_12
Order: Burkholderiales (92.07%)
164 184606 bp 63.85 109.75 85.53
cn_combo_scaffold_1322 ACV108_11
Order: Burkholderiales (98.37%)
123 136720 bp 64.59 112.15 90.24
cn_combo_scaffold_2810 ACV108_44
Order: Burkholderiales (100%)
102 102370 bp 65.35 105.90 88.85
cn_combo_scaffold_1579 ACV108_14
Order: Burkholderiales (91.09%)
101 111605 bp 63.96 102.64 89.93
cn_combo_scaffold_2307 ACV108_30
Order: Burkholderiales (100%)
100 110437 bp 64.62 107.86 91.79
cn_combo_scaffold_2615 ACV108_32
Order: Burkholderiales (97.56%)
82 77930 bp 65.69 98.66 87.56
cn_combo_scaffold_929 ACV108_2
Order: Burkholderiales (82.72%)
81 84153 bp 64.22 108.04 90.34
cn_combo_scaffold_1245 ACV108_4
Order: Burkholderiales (97.53%)
81 76377 bp 64.29 107.06 88.99
cn_combo_scaffold_2129 ACV108_24
Order: Burkholderiales (97.33%)
75 80028 bp 65.87 107.33 91.42
cn_combo_scaffold_2706 ACV108_38
Order: Burkholderiales (94.37%)
71 81595 bp 65.99 113.03 89.46
cn_combo_scaffold_1283 ACV108_6
Order: Burkholderiales (100%)
67 89006 bp 66.60 114.59 90.11
cn_combo_scaffold_1871 ACV108_21
Order: Burkholderiales (96.97%)
66 59230 bp 62.69 110.59 89.52
cn_combo_scaffold_2683 ACV108_34
Order: Burkholderiales (98.36%)
61 62272 bp 66.06 109.34 90.89
cn_combo_scaffold_2648 ACV108_33
Order: Burkholderiales (96.61%)
59 60718 bp 63.76 104.86 88.91
cn_combo_scaffold_794 ACV108_1
Order: Burkholderiales (94.64%)
56 57134 bp 64.27 78.06 90.48
cn_combo_scaffold_3403 ACV108_54
Order: Burkholderiales (100%)
53 50661 bp 65.66 109.70 87.49
cn_combo_scaffold_2144 ACV108_22
Order: Burkholderiales (96.15%)
52 65546 bp 64.89 105.92 90.74
cn_combo_scaffold_3400 ACV108_56
Order: Burkholderiales (94.23%)
52 62643 bp 64.97 109.94 88.08
cn_combo_scaffold_2747 ACV108_37
Order: Burkholderiales (94.12%)
51 46456 bp 63.14 106.26 85.03
cn_combo_scaffold_1389 ACV108_7
Order: Burkholderiales (100%)
49 50762 bp 66.07 105.38 85.52
cn_combo_scaffold_2735 ACV108_36
Order: Burkholderiales (97.92%)
48 53461 bp 65.38 103.38 90.16
cn_combo_scaffold_3346 ACV108_52
Order: Burkholderiales (100%)
46 49362 bp 62.33 105.07 90.99
cn_combo_scaffold_3561 ACV108_63
Order: Burkholderiales (95.65%)
46 47225 bp 64.67 105.13 88.23
cn_combo_scaffold_1847 ACV108_19
Order: Burkholderiales (86.67%)
45 54925 bp 64.29 102.26 86.33
cn_combo_scaffold_2919 ACV108_42
Order: Burkholderiales (97.78%)
45 44325 bp 62.21 113.16 92.14
cn_combo_scaffold_3152 ACV108_48
Order: Burkholderiales (100%)
45 49070 bp 64.46 106.53 90.79
cn_combo_scaffold_3615 ACV108_65
Order: Burkholderiales (97.78%)
45 45731 bp 65.22 103.06 87.43
cn_combo_scaffold_1106 ACV108_191
Order: Burkholderiales (95.45%)
44 44755 bp 64.91 104.61 87.30
cn_combo_scaffold_1233 ACV108_3
Order: Burkholderiales (97.73%)
44 43658 bp 66.48 109.40 89.89
cn_combo_scaffold_1733 ACV108_16
Order: Burkholderiales (100%)
44 52375 bp 65.06 103.11 88.29
cn_combo_scaffold_4138 ACV108_80
Order: Burkholderiales (90.7%)
43 47416 bp 65.08 104.06 89.01
cn_combo_scaffold_4818 ACV108_92
Order: Burkholderiales (90.48%)
42 42533 bp 62.64 107.91 90.45
cn_combo_scaffold_3157 ACV108_188b
Order: Burkholderiales (82.93%)
41 40959 bp 60.10 112.33 92.46
cn_combo_scaffold_1722 ACV108_15
Order: Burkholderiales (100%)
40 40607 bp 66.06 114.07 90.57
cn_combo_scaffold_1753 ACV108_17
Order: Burkholderiales (97.5%)
40 42633 bp 65.99 110.97 92.67
cn_combo_scaffold_3010 ACV108_45
Order: Burkholderiales (92.5%)
40 46242 bp 64.51 104.50 89.78
cn_combo_scaffold_1307 ACV108_5
Order: Burkholderiales (97.44%)
39 43923 bp 63.25 103.62 90.60
cn_combo_scaffold_1404 ACV108_8
Order: Burkholderiales (94.87%)
39 43977 bp 64.57 114.04 87.75
cn_combo_scaffold_1643 ACV108_13
Order: Burkholderiales (100%)
39 47164 bp 65.89 108.24 91.40
cn_combo_scaffold_3826 ACV108_69
Order: Burkholderiales (100%)
38 39139 bp 60.91 109.01 92.80
cn_combo_scaffold_1855 ACV108_18
Order: Burkholderiales (94.12%)
34 34092 bp 62.34 107.49 89.02
cn_combo_scaffold_3185 ACV108_49
Order: Burkholderiales (97.06%)
34 39351 bp 65.20 103.04 92.18
cn_combo_scaffold_3644 ACV108_66
Order: Burkholderiales (94.12%)
34 38975 bp 65.75 108.23 90.25
cn_combo_scaffold_5259 ACV108_94
Order: Burkholderiales (94.12%)
34 30734 bp 66.23 109.34 88.04
cn_combo_scaffold_1433 ACV108_9
Order: Burkholderiales (96.97%)
33 35916 bp 64.26 109.15 91.29
cn_combo_scaffold_3815 ACV108_68
Order: Burkholderiales (96.97%)
33 39104 bp 66.04 106.91 89.78
cn_combo_scaffold_1875 ACV108_20
Order: Burkholderiales (100%)
32 39353 bp 65.49 108.94 89.08
cn_combo_scaffold_3305 ACV108_51
Order: Burkholderiales (96.88%)
32 40066 bp 65.80 103.17 91.81
cn_combo_scaffold_2198 ACV108_23
Order: Burkholderiales (100%)
30 36101 bp 64.97 108.00 88.55
cn_combo_scaffold_3958 ACV108_72
Order: Burkholderiales (96.67%)
30 35065 bp 63.50 100.75 83.67
Displaying items 1-50 of 190 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.