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cn_combo_scaffold_153_18

Organism: CN-SCN_Gemmatimonadetes_22x

near complete RP 53 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: comp(17224..18036)

Top 3 Functional Annotations

Value Algorithm Source
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197};; TaxID=861299 species="Bacteria; Gemm similarity UNIPROT
DB: UniProtKB
  • Identity: 55.7
  • Coverage: 271.0
  • Bit_score: 280
  • Evalue 1.80e-72
Diaminopimelate epimerase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=DAPF_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 45.3
  • Coverage: 278.0
  • Bit_score: 220
  • Evalue 2.10e-54
Diaminopimelate epimerase similarity KEGG
DB: KEGG
  • Identity: 55.7
  • Coverage: 271.0
  • Bit_score: 280
  • Evalue 3.70e-73

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Taxonomy

Gemmatimonadetes bacterium KBS708 → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 813
ATGGCCGGACGGCGATTCTGGAAGATGAGCGGGTCGGGGAACGACTTCGTCTTCTTCGACGCGATGCGCGAGTCCGCGGGCGCGCTGGCGACCCCGGAAGTGATCGGGCGGCTGTGCGAGCGCCGAACGGGGATCGGCGCCGATGGCGTGGTCTTCCTCGAGCCGCACCCGACGCACGCCTTCTCCATGCGCTATTTCAACCGCGACGGTACGCTGGCCGAGATGTGCGGCAATGCCGCGCTGTGCAGCACGCGGCTCGCGACCGAGCTCGGTATCGTCCGCGGGGGAGATTTCGCCTTCCAGACGGTCTCAGGCCCCGTGACGGGGCGGTTCGTGGACGGACACCCGGAGATCGACATGGTGCCGGTCACCGATCTCCAGGCGCGCTTCGACACCCCCCTGATTCCGGGCGAGGAACGGATGGGGTTCGCGCGCGTCGGTGTCCCGCACCTCGTGGTACTGGTGCCGGACGTCGAACAGGTCGACGTCTATCACCGCGGCAAGGAGCTCCGGAACCTCCCCGGGCTTCGCGACGGGGCGAATGCGAACTTCGTCTCGCGCACCCCCTCGGGCGGGTGGTCGATCCGCACGTACGAGCGCGGGGTGGAGGAAGAGACGCTCGCCTGCGGGACCGGCTCGGTCGCCGCGGCCTCGCTCCTGACGGCGTGGGGACTCATCCCCGGGAGCGTGACGCTGACGACCCGCTCGGGGTGCGAGCTCCGCGCCTCGGTGGCGGAAGGGACGGAGAAGGGAATCCCGGTGCTCCGCGGCGAGGGACGCATCGTCTTCGAGGGGACGTTGGGCGAAATCTGA
PROTEIN sequence
Length: 271
MAGRRFWKMSGSGNDFVFFDAMRESAGALATPEVIGRLCERRTGIGADGVVFLEPHPTHAFSMRYFNRDGTLAEMCGNAALCSTRLATELGIVRGGDFAFQTVSGPVTGRFVDGHPEIDMVPVTDLQARFDTPLIPGEERMGFARVGVPHLVVLVPDVEQVDVYHRGKELRNLPGLRDGANANFVSRTPSGGWSIRTYERGVEEETLACGTGSVAAASLLTAWGLIPGSVTLTTRSGCELRASVAEGTEKGIPVLRGEGRIVFEGTLGEI*