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cn_combo_scaffold_1506_31

Organism: CN-SCN_Gemmatimonadetes_22x

near complete RP 53 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: comp(34428..35498)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 79.6
  • Coverage: 357.0
  • Bit_score: 564
  • Evalue 8.40e-158
DNA-directed RNA polymerase subunit alpha n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4J0_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 75.9
  • Coverage: 353.0
  • Bit_score: 544
  • Evalue 6.40e-152
DNA-directed RNA polymerase subunit alpha similarity KEGG
DB: KEGG
  • Identity: 79.6
  • Coverage: 357.0
  • Bit_score: 564
  • Evalue 1.70e-158

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Taxonomy

Gemmatimonadetes bacterium KBS708 → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1071
ATGTCTCAAGCGATCGACCTGAAGGGCCTGGTTCGTCCCCACCTCGTCGAGGTCCGGAAGCGGGATGAGGCACCGTACGTCGCCGAATTCGTCCTCCAGCCGCTCGAGCGGGGCTACGGCCACACGCTCGGCAATGCCATGCGGCGCATGCTGCTCTCGTCGCTTCGCGGCGCCGCGGTCTGGGGCTTCCGGATCGATGGAGTGGTGCACGAGCACCAGACCATCGCCGGCGTCGTCGAGGACGTCCACCAGATCATCGGCAACCTCAAGACGCTCGTCCTCAGCATGGCCGACGACGTCGAGGAAACGGTGCTGCGCATCGGGAAGTCCGAGGCGGGGCCCGTCACCGCCGGCGACATCGACCAGAGCGGGAGCGTCCGGGTCATCAACCCGAACCACCACCTGTTCACGCTGCAAGACGCACGCGACATCAACGTCGAGCTCTACGTGAACAAGGGGCGTGGCTACGTCGAGTCCGAGCAGCACGTCCTCGACCGCGGCCTCCCCATCGACCTCGTTCGCGTCGACGCGATCTACAACCCCGTTCGCCGCGCCAACTTCAGCGTCGCGGAGACCCGCGTCGGGCAGCGCACCGACTACGATCGCCTCACGCTCACCGTCGAGACCAACGGCACCATCACGCCGGAAGAGGCGGTCAGCTACGCCGCGGCGCTGGCGCAGACGCACTTCCAGTACTTCGCCTCCTTCGGCTCGCACGCTTCGGCGCCGATGTCGATGGGCGGGGATAGCGCCGGCGGGGATGCGGCTCGCCTCGCGCAGCTCTTCAAGACGGCCATCGACGACCTCGAGCTCTCGGTTCGCTCGGTGAACTCGCTGAAGAACTCCAACATCCGTACCCTGGGTGACCTGGTCCGCCAGACCGAGAACCAGATCCTCCAGGTCAAGAATTTCGGGAAGAAGTCGCTGCAGGAGATCGCTGACCTCCTGGAGCGCGAAGGCTTGAACTTCGGCATGCGCTACGAAGAGAACGGCGAGGGCGTCCGCATCATCGACCTGGGGACCCCGCCGAGCCGCGCGGCCGCGAACGCGCCAGACGACGAAGAGGAGTAA
PROTEIN sequence
Length: 357
MSQAIDLKGLVRPHLVEVRKRDEAPYVAEFVLQPLERGYGHTLGNAMRRMLLSSLRGAAVWGFRIDGVVHEHQTIAGVVEDVHQIIGNLKTLVLSMADDVEETVLRIGKSEAGPVTAGDIDQSGSVRVINPNHHLFTLQDARDINVELYVNKGRGYVESEQHVLDRGLPIDLVRVDAIYNPVRRANFSVAETRVGQRTDYDRLTLTVETNGTITPEEAVSYAAALAQTHFQYFASFGSHASAPMSMGGDSAGGDAARLAQLFKTAIDDLELSVRSVNSLKNSNIRTLGDLVRQTENQILQVKNFGKKSLQEIADLLEREGLNFGMRYEENGEGVRIIDLGTPPSRAAANAPDDEEE*