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cn_combo_scaffold_426_73

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(68951..69724)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003783343 similarity UNIREF
DB: UNIREF100
  • Identity: 83.2
  • Coverage: 256.0
  • Bit_score: 415
  • Evalue 3.30e-113
transcriptional regulator PcaR similarity KEGG
DB: KEGG
  • Identity: 68.4
  • Coverage: 256.0
  • Bit_score: 339
  • Evalue 1.10e-90
Transcriptional regulator PcaR {ECO:0000313|EMBL:BAB50896.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium l similarity UNIPROT
DB: UniProtKB
  • Identity: 68.4
  • Coverage: 256.0
  • Bit_score: 339
  • Evalue 5.40e-90

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Taxonomy

Mesorhizobium loti → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 774
ATGAGCGACGAGGAAACAGGCCGAGACCACGTGACTTCGCTGGAGCGCGGCCTGGCTGTGATGGAGATACTGGCAGCAAATCCACGCGGCCTGACGCTGACGGAGACCGCCGAAAAGGCCGGGCTCACCCGAGCCGGCGCGCGACGCTTCCTGCTGACACTGGTGGCTACGGGGTATGCAGTGCAGACCGGTCGCAACTTCTCGCTGTCGCCGCGGTTGCTTGCCCAGGCCCGCATCTGGCTGCACGGCGTGCCGCTCTGGACCTTCGCCGAGCCGTTCATGAAGGATACGGCCGCCAATCTCCACGAATCCTGCTCCGCGGCGATCCTGTCGGGCGAGGACATGGTCTATGTTGCGCGTGTGCCGGGACCGCGCATCATCGCCGTCGACCTGCAGGTCGGCGCCCACCTGCCCGCCTTCTGCACCGCCATGGGGCGCGTGCTGCTGTCGGGCCTCTCCACGCCGGATCTCGACGCCTTCCTGGCGCGCGCGACGTTCAGGCAGCGCACACCCAAGACCGTCACCGACGCGGCGAAGCTCAGGGAGATCATCGACGGCGTGCGCGGCAGCGGCTACGCCGTCGTCGACGAGGAACTGGAGATCGGCCTGCGCTCGATCGCCGTGCCGCTGCGCGACCGCTCGGGCGCGGTCGTCGCCGCAATCAACGTGTCGACGCAGAGCTCGCGCCACAGCCCAGCCGAAATGGAAGCCGAGATCCTGCCAATCCTCAAGGAGACCGCAGCGCGGATCAGCGACTTCTTCGTGGTCCAGTGA
PROTEIN sequence
Length: 258
MSDEETGRDHVTSLERGLAVMEILAANPRGLTLTETAEKAGLTRAGARRFLLTLVATGYAVQTGRNFSLSPRLLAQARIWLHGVPLWTFAEPFMKDTAANLHESCSAAILSGEDMVYVARVPGPRIIAVDLQVGAHLPAFCTAMGRVLLSGLSTPDLDAFLARATFRQRTPKTVTDAAKLREIIDGVRGSGYAVVDEELEIGLRSIAVPLRDRSGAVVAAINVSTQSSRHSPAEMEAEILPILKETAARISDFFVVQ*