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cn_combo_scaffold_513_38

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(34977..35876)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Hoeflea sp. 108 RepID=UPI00037843D3 similarity UNIREF
DB: UNIREF100
  • Identity: 90.1
  • Coverage: 293.0
  • Bit_score: 512
  • Evalue 3.90e-142
Transcriptional regulator, LysR family {ECO:0000313|EMBL:CDX42465.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Me similarity UNIPROT
DB: UniProtKB
  • Identity: 82.0
  • Coverage: 294.0
  • Bit_score: 479
  • Evalue 3.00e-132
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 80.5
  • Coverage: 293.0
  • Bit_score: 470
  • Evalue 2.80e-130

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Taxonomy

Mesorhizobium sp. ORS3359 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 900
ATGTCAAACGGAGGCCCGATGAACTGGGATGACGTCCGTATCTTCCTGGCGGTCGCACGCACCGGCCAGATCCTGGGCGCGGCGCGGCGGCTGGAACTGAACCACGCCACCGTCTCGCGCCGCGTTGCGGCGCTCGAGGAGGCGCTGAAGACCAAGCTGTTCCGGCGCCTGACCACCGGTAGCGAGCTGACGCCTGCCGGCGAGCGCTTCCTGGACATTGCCGAACGCATGGAAGCCGACATGCTGACCGCCCGCGCCGAGATCGCCGGCGAAGGCGACGAGGTGGCCGGCACGGTGCGTATCGGCGCTCCCGATGGCTTCGGCGTCGCCTTCCTGGCACAGCGGCTCGGGACGCTGACCACCCAGCATGCGGACCTGAAGATCCAGCTCGTGCCGGTTCCACGCACGTTTTCATTGTCGCGGCGCGAGGCCGACATAGCGATCACGACCGAGCGCCCGAGCGAAGGACGGCTGGTCGCCGTGAAGCTGGTCGACTATTCGCTGGGGCTGTTCGCGTCGCGCAGCTATGCCGAGCAGAACGGGCTGCCCTCCAGCCGTAACGACTTGGCGGAGCATCGCCTGATCGGCTACGTGCCCGACCTGGTGGTAAGCGCTTCGCTCGACTATGCGGCGGAGTTCAGCCCGACCTGGGAGTCGGCATTCTCGATTTCTTCGGCGCTGGGCCAGGTCGAGGCGGTTCGTTCGGGCGCCGGCATCGGCATCCTCCACACCTTCATCGCGCGCACCATCCCGGAAATCGTGCCTGTGACGGCGATCGCCCCGATCCGGCGCGCCTATTGGCTGGTCTATCACGAGTCCGTCCGCTCGCTTCGCCGCATCCAGACGGTCGCGGGCTTCATCACCAAATCGGTCGAACGCGAGCGCACCCTGTTCGTCTGA
PROTEIN sequence
Length: 300
MSNGGPMNWDDVRIFLAVARTGQILGAARRLELNHATVSRRVAALEEALKTKLFRRLTTGSELTPAGERFLDIAERMEADMLTARAEIAGEGDEVAGTVRIGAPDGFGVAFLAQRLGTLTTQHADLKIQLVPVPRTFSLSRREADIAITTERPSEGRLVAVKLVDYSLGLFASRSYAEQNGLPSSRNDLAEHRLIGYVPDLVVSASLDYAAEFSPTWESAFSISSALGQVEAVRSGAGIGILHTFIARTIPEIVPVTAIAPIRRAYWLVYHESVRSLRRIQTVAGFITKSVERERTLFV*