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cn_combo_scaffold_972_3

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(4249..5604)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00035FB3C6 similarity UNIREF
DB: UNIREF100
  • Identity: 81.0
  • Coverage: 443.0
  • Bit_score: 697
  • Evalue 9.80e-198
RNA polymerase sigma-70 factor, ECF subfamily protein {ECO:0000313|EMBL:KFE72203.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacterace similarity UNIPROT
DB: UniProtKB
  • Identity: 65.6
  • Coverage: 413.0
  • Bit_score: 532
  • Evalue 7.70e-148
RNA polymerase subunit sigma-24 similarity KEGG
DB: KEGG
  • Identity: 66.1
  • Coverage: 413.0
  • Bit_score: 529
  • Evalue 1.30e-147

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Taxonomy

Hyalangium minutum → Hyalangium → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1356
ATGCCAGCCGGCACCCGCTCCAGGCCCGGGCCGCCGCCTCCGGCCCGGGAGGACGATACCCTAGACAGTCCGGCCAAGAGCCGCGCGACGCACCGAACCATCGAAACCGTGTTCCGCATGGAGCGGGCACGGATCGTGGCGGCACTGGCCCGCTTCACCCGCAGCGTCGACCTGGCCGAAGAGTTCGCCCAGGACGCCCTCATAGCCGCATTGCGCAGTTGGCCCGAGACAGGCGTCCCGGACAAGCCAGGCGCCTGGCTGATCGCGTCCGCCAGACGGCGGGCGATCGATCATTTCCGCAGGGCGAAGATGGCGGGCGGCAAGCTCGCACTGCTCGGCATCGACGCCGAACTCGAAGCGATGCCCGAGCATGTCGAGCCGGACCAGGGCCCTGGCGACGAGATGCTCGGCCTGATGTTCGTGTCCTGCCATCCGGTGCTGTCGACCGAGGCGCGCGTCGCGTTGACCCTGCGGCTGGTCGGCGGCCTGACCACCGAAGAAATTGCGCGCGCCTTTCTCGTCACAGAAACCACCATGTCCCAGCGCATCGTGCGGGCCAAGCGCAGCTTGTCGGACGCCGGCGTGCCGTTCGAAGTGCCATTGGGCCCGGACCGCGCCGAACGGCTGAACTCGGTGCTCGAGGTGCTCTATCTCATCTTCAACGAAGGGTACTCGGCCACCCGCGGCGACGACTGGATGCGGCCACAGCTCTGCCAGGAGGCGATGCGGCTGGGGCGCATGCTGGCCGGGCTCGCTCCCGAAGACGCGGAGGTCCACGGCCTGATCGCCCTGATGGAAATCCAGGCATCGCGAATGCCGGCGCGCAGCGACGCCGAAGGCAGGCCGATCCTGCTGCTCGACCAGAACCGGGCGCGTTGGGACCATCTGCTGATCCGGCGCGGCCTTGCCGCGCTCGCGTTGGCGCAGTCGCTCGCAAACCCGCCCGGCCCCTACGTATTGCAGGCCGCGATTGCTGCTTGCCACGCCCGCGCGCCGACCGCGGCGCAAACCGACTGGATGCACATCGCCGCGCTCTATGCTGCGTTGATCTCGCTGACGCCGTCGCCCGTCATCGAGCTGAACCGGGCCATGGCGATCGCAATGGCCTTTGGTCCTGCCGCCGGGCTGGAACTCGCCGACCAGTTGGCGCACGACCCCGCCTTGCGCAACTACCATCTCCTGCCCAGTGTCCGCGCCGACCTGCTCATGCGGCTCGGTCGTCACGAGCAGGCACTCGCCGAGTTCGAGCGCGCGGCGTCGCTCACCCAGAACGAGCGCGAGCGGACGATGCTTCTGGAACGAGCGCAGGCCTGCCGCGCCAAGCTGGAACGCGAGGTAACCACGCTAGGCATATGA
PROTEIN sequence
Length: 452
MPAGTRSRPGPPPPAREDDTLDSPAKSRATHRTIETVFRMERARIVAALARFTRSVDLAEEFAQDALIAALRSWPETGVPDKPGAWLIASARRRAIDHFRRAKMAGGKLALLGIDAELEAMPEHVEPDQGPGDEMLGLMFVSCHPVLSTEARVALTLRLVGGLTTEEIARAFLVTETTMSQRIVRAKRSLSDAGVPFEVPLGPDRAERLNSVLEVLYLIFNEGYSATRGDDWMRPQLCQEAMRLGRMLAGLAPEDAEVHGLIALMEIQASRMPARSDAEGRPILLLDQNRARWDHLLIRRGLAALALAQSLANPPGPYVLQAAIAACHARAPTAAQTDWMHIAALYAALISLTPSPVIELNRAMAIAMAFGPAAGLELADQLAHDPALRNYHLLPSVRADLLMRLGRHEQALAEFERAASLTQNERERTMLLERAQACRAKLEREVTTLGI*