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cn_combo_scaffold_1422_39

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(44114..44977)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter permease n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI000301AB8C similarity UNIREF
DB: UNIREF100
  • Identity: 95.1
  • Coverage: 287.0
  • Bit_score: 536
  • Evalue 1.80e-149
Branched-chain amino acid ABC-type transport system, permease component {ECO:0000313|EMBL:EJK86471.1}; Flags: Precursor;; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobia similarity UNIPROT
DB: UniProtKB
  • Identity: 86.8
  • Coverage: 287.0
  • Bit_score: 500
  • Evalue 1.60e-138
branched-chain amino acid uptake ABC transporter permease similarity KEGG
DB: KEGG
  • Identity: 86.4
  • Coverage: 287.0
  • Bit_score: 498
  • Evalue 1.20e-138
  • rbh

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Taxonomy

Rhizobium sp. AP16 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 864
ATGCAAACCGTATTCAGCGTTGGGATCGACGCCCTTGCCTACGGCATGGTGCTGTTCGTCATCTCGATCGGACTCTCGGTGACCATGGGCTTGATGCGCGTGGTCAACCTCGCCCACGGCGCCTTCGCCATGATCGGCGGCTACATCGCCTCCTATGCCGCGCAGACCCTCGGCTTCGGCTATGCCCTGGCGGTGCTGGTCGCCGTCGTCGGCACGATCCTGATCGCCATTCCCGTCGAGCGCTTCCTCTACCGCCGCATCTACGGCGCGCCCGAACTCACCCAGGTGCTGATGACCATCGGCATCACCTTCTGCGTCATCGGCATCGCCAACTACGTGTTCGGGCCGACGCTGAAGACGATCCCGCTGCCCGAGACTCTGCGCGGACCGGTGGACCTCGGCTTCCGCACCATCGCCGCGCACAAGCTGTTCGCCATCGCCTGCGGCGTAGTCGTCGCGGCCGCGCTCTGGTACCTGATCGAGAAGACGTCCTTCGGCGTCAAGCTGCGCGCCTCGGTCGACAATGCCGCCATGGCAGCTTCGCTCGGCGTACGTACCAAGATCGTCTATGCCGTGAGCTTCGCGGTCGCGGTCGGCCTCGCGGCCTTCGGCGGCATCGTCGGCGCCGAGCTTCTGCCGATCGAGCCCTATTACGCGCTGCGCTACATGGTGACCTTCCTGGTCGTCGTCTCGGTCGGCGGCGCGGGATCGATCCCCGGCGCGCTGCTGGCCTGCCTGCTGCTCGGCGCGATCGACACCACCGGACGCTACCTGCTGCCGGAATATGGCGAGTTCTTCTTTTATCTCGCCGTCATCGCAATCGTCTGCGTGTTTCCGCGCGGGCTTCTCGGCAGGAGCAAATAG
PROTEIN sequence
Length: 288
MQTVFSVGIDALAYGMVLFVISIGLSVTMGLMRVVNLAHGAFAMIGGYIASYAAQTLGFGYALAVLVAVVGTILIAIPVERFLYRRIYGAPELTQVLMTIGITFCVIGIANYVFGPTLKTIPLPETLRGPVDLGFRTIAAHKLFAIACGVVVAAALWYLIEKTSFGVKLRASVDNAAMAASLGVRTKIVYAVSFAVAVGLAAFGGIVGAELLPIEPYYALRYMVTFLVVVSVGGAGSIPGALLACLLLGAIDTTGRYLLPEYGEFFFYLAVIAIVCVFPRGLLGRSK*