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cn_combo_scaffold_2462_5

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(2739..3455)

Top 3 Functional Annotations

Value Algorithm Source
rph; ribonuclease PH (EC:2.7.7.56) similarity KEGG
DB: KEGG
  • Identity: 92.4
  • Coverage: 238.0
  • Bit_score: 450
  • Evalue 3.10e-124
Ribonuclease PH {ECO:0000255|HAMAP-Rule:MF_00564}; Short=RNase PH {ECO:0000255|HAMAP-Rule:MF_00564};; EC=2.7.7.56 {ECO:0000255|HAMAP-Rule:MF_00564};; tRNA nucleotidyltransferase {ECO:0000255|HAMAP-Rul similarity UNIPROT
DB: UniProtKB
  • Identity: 92.4
  • Coverage: 238.0
  • Bit_score: 450
  • Evalue 1.60e-123
ribonuclease PH n=1 Tax=Hoeflea sp. 108 RepID=UPI0003662B12 similarity UNIREF
DB: UNIREF100
  • Identity: 96.6
  • Coverage: 238.0
  • Bit_score: 469
  • Evalue 2.30e-129

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Taxonomy

Mesorhizobium loti → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 717
ATGCGCCCCTCCAAACGCCAGTTCGACGAAATGCGCGCCATCTCCTTCGAGCGCAACGTGTCCAAGCACGCCGAAGGTTCGTGCCTGGTCAAGTTCGGCGACACCCACGTTCTGTGCACCGCGAGCCTCGAGGAGAAGGTGCCGGGCTGGATGCGCAATTCCGGCAAGGGCTGGGTCACGGCCGAATACGGCATGCTGCCGCGCTCGACCGGCGAGCGCATGCGTCGCGAGGCTTCTTCCGGCAAGCAGGGTGGCCGCACGCTTGAGATCCAGCGCCTGATCGGCCGTTCTTTGCGCGCCGTCGTCGACATGCAGGCGCTGGGCGAACAGCAGATCACCGTCGACTGCGACGTGCTGCAGGCCGATGGCGGCACGCGCACGGCCTCGATCACCGGCGCCTGGATCGCCCTGCACGACTGCCTGCGCTGGATGGAAGCGCGCCAGATGGTGAAGGTCGACAAGGTGCTGAAGGACCATGTCGCGGCGATCTCCTGCGGCATCCATGACGGCCAGCCGGTGCTCGACCTCGACTATCTCGAGGATTCGGCCGCCGGTACCGACGCCAACTTCGTCATGACCGGCAAGGGTGGCATCGTCGAGATCCAGGGCACCGCCGAAGGCACCCCGTTCTCGGAGGAAGAGTTCCTGCAGCTGATGGGCCTCGCCCGCAAGGGCATCTCGCGGCTGGTCAGCCTGCAGCAGATGGCGGTGGCGTAA
PROTEIN sequence
Length: 239
MRPSKRQFDEMRAISFERNVSKHAEGSCLVKFGDTHVLCTASLEEKVPGWMRNSGKGWVTAEYGMLPRSTGERMRREASSGKQGGRTLEIQRLIGRSLRAVVDMQALGEQQITVDCDVLQADGGTRTASITGAWIALHDCLRWMEARQMVKVDKVLKDHVAAISCGIHDGQPVLDLDYLEDSAAGTDANFVMTGKGGIVEIQGTAEGTPFSEEEFLQLMGLARKGISRLVSLQQMAVA*