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cn_combo_scaffold_2504_25

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(31285..32343)

Top 3 Functional Annotations

Value Algorithm Source
type VI secretion protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00035F4901 similarity UNIREF
DB: UNIREF100
  • Identity: 77.3
  • Coverage: 352.0
  • Bit_score: 562
  • Evalue 2.30e-157
Type VI secretion protein {ECO:0000313|EMBL:ESY89941.1}; TaxID=1287226 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium s similarity UNIPROT
DB: UniProtKB
  • Identity: 69.5
  • Coverage: 371.0
  • Bit_score: 524
  • Evalue 1.30e-145
type VI secretion protein, vc_a0111 family similarity KEGG
DB: KEGG
  • Identity: 69.4
  • Coverage: 359.0
  • Bit_score: 507
  • Evalue 4.20e-141

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Taxonomy

Mesorhizobium sp. LNHC209A00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1059
ATGGCCGATGACGCCCGGCAACCGCTTCCTGATATAGGCGCCGCGCCCACGGAGGCCTACGACTTCTTTGAATTGCTGCGGCAGCTCGAAAGGCCCGGTGGCCGCTTGTTCGGCCATGCCGGGCGGCCCGAACGTGAACCGGCCCGCCTCGGGCAGCATGTCCGCCTCGGCTTCGCCACGCAGGATGTGGTGAGGTTCGAACCGGGAAGCGACAAAGGCCCTGCCCGCGTGACCGTGGCCAACATCGGCCTGCTTGGCCCGGAAGGTCCGCTGCCGCTGCATATCACCCGCTGGGTGCTCGACCGCCTGTCGCAACGGTGGTTCGGCGGAGCCGACGCCCACCAGACCAGCGACACAACCTTCGTCGATTTCGTCAACACGCTGCAGCACCGCATGATCGCCCTGTTCTACCGGGCCTGGGCGGACGCTCATCCAGCGGTGCAGGTGGAGCGAAGGGTCGGTGGCCGCGTGCGATCCATGCTCGAGGCGATGGCAGGCATGGGGCTGCCGGGAACCTCCAACCCGGAAGAACCGGATTTGGACGCGGTGAAACTGCGGCAGGCCGCCGCCATCGCATGCCAAGTGGACGGACCCGAGCGCCTTACGCTCTTCATCGCCGAGGCCTTCAAGGTTCCGGTGCAGCTCAAGGAGTTCGTGGCGGCGTGGCTGCCGATACCCGGACCATTGCAGACACGGGTGGGATCTGCGCATGCGCAATTGGGGCGTGGCGCAACCATCGGACCGCGCAGTTTCACCCGCCAGAGCAGGATCGAACTGCGCATCGGTCCGCTCGATTTCACGACCTATCTGGAATTCCTTCCGGGTAGCCGCCGGCTTGCGGTGTTGAGACGGGCGGTAAGCGACCTGATCGGCGAGGTACTGGATGTCGATCTCAGGGTTGTCCTGGCGCGCGAAGAGGTGCCTGCGGCCCGGATCGGAGCGGCGCGGATCGGCAGAACGGCGTGGCTTGCGCCCCCCGTGGAAAGGGCGGATGCTGAGGATATGCGCCTGCGGACGGTCGTCGGCTGGCGCCCCGATCTGGCGGGAGCCGCGGCATGA
PROTEIN sequence
Length: 353
MADDARQPLPDIGAAPTEAYDFFELLRQLERPGGRLFGHAGRPEREPARLGQHVRLGFATQDVVRFEPGSDKGPARVTVANIGLLGPEGPLPLHITRWVLDRLSQRWFGGADAHQTSDTTFVDFVNTLQHRMIALFYRAWADAHPAVQVERRVGGRVRSMLEAMAGMGLPGTSNPEEPDLDAVKLRQAAAIACQVDGPERLTLFIAEAFKVPVQLKEFVAAWLPIPGPLQTRVGSAHAQLGRGATIGPRSFTRQSRIELRIGPLDFTTYLEFLPGSRRLAVLRRAVSDLIGEVLDVDLRVVLAREEVPAARIGAARIGRTAWLAPPVERADAEDMRLRTVVGWRPDLAGAAA*