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cn_combo_scaffold_3954_8

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(7972..8832)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036FE87F similarity UNIREF
DB: UNIREF100
  • Identity: 88.1
  • Coverage: 286.0
  • Bit_score: 495
  • Evalue 3.60e-137
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 72.6
  • Coverage: 285.0
  • Bit_score: 426
  • Evalue 5.80e-117
LysR family transcriptional regulator {ECO:0000313|EMBL:ESY96609.1}; TaxID=1287240 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mes similarity UNIPROT
DB: UniProtKB
  • Identity: 72.6
  • Coverage: 285.0
  • Bit_score: 426
  • Evalue 2.90e-116

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Taxonomy

Mesorhizobium sp. LNHC229A00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 861
ATGACCGTTCGTCTCGACAGCGACCTGCTGCGCACCTTCCTGGCGGTGGCGGAGAGCGGCAATTTCACCCGCGCGGCGGAGACGGTCGGCCGTACGCAATCGGCGATCAGCATGCAGATCAAGCGCCTCGAGGAGGTGGTAGGCGAGGTCCTGTTCGAGCGCGGCGCACGCGGTGTCACGCTCACCCGGCGGGGCGGCGACCTCGTCGCAAATGCGCGCCGTATCGTCAGCCTGCTCGACGAGACGGCCGCCTCCATGCGTTCGGCGCCGCTCGGCGGCCCCGTCCGGATCGGCCTGCCGGAAGAGTACGGCCAGCCCGTCCTGTCACGAGCGCTCGGGGCCTTCGCGCAGCGCCATGCACAGGTCGAGGTGACCGTCAGGTTCGGCTATTCCGCCTCGCAAATGGCTGCCCTCGCGGCCGGAGAGCTTGATTTGGCTGTGGTTTTCGAATGGCAGGAGCCTTCCGGCGCCGAGGTTCTGATGGACGACCCGACCGTCTGGGTCACCTCCAACCGGCACCAGTTGCACGAGGAGCGGCCGCTGCCCATCGCCGTCTACAGCCGCGAAGGGTGGTCGCGCGAATACGTCCTCGCCTCGCTGGAGCGACGGGGTATCGACTATCGCTTCGCCTATACCAGCGACACCACCAACGGCCTCCTGCTCGCGGTGACGGCCGGGCTTGCCGTGGCGCCGATATCGAGGTCCAACATCCCCCCGGATTGCCGCGAACTCACCGAGGCCGACGGCTTCGGGCAGATCGACAGGACGAGGGTCGTACTGCACCGAAATCCGCGCGCCAACAGCGAAGCCGTCGATGTCATGGCGTCCGCCATACGCGAGGCTTTCCATCAGCGGCGCTGA
PROTEIN sequence
Length: 287
MTVRLDSDLLRTFLAVAESGNFTRAAETVGRTQSAISMQIKRLEEVVGEVLFERGARGVTLTRRGGDLVANARRIVSLLDETAASMRSAPLGGPVRIGLPEEYGQPVLSRALGAFAQRHAQVEVTVRFGYSASQMAALAAGELDLAVVFEWQEPSGAEVLMDDPTVWVTSNRHQLHEERPLPIAVYSREGWSREYVLASLERRGIDYRFAYTSDTTNGLLLAVTAGLAVAPISRSNIPPDCRELTEADGFGQIDRTRVVLHRNPRANSEAVDVMASAIREAFHQRR*