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cn_combo_scaffold_4125_10

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(6021..6959)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine-5'-phosphate glycosidase {ECO:0000256|HAMAP-Rule:MF_01876}; Short=PsiMP glycosidase {ECO:0000256|HAMAP-Rule:MF_01876};; EC=4.2.1.70 {ECO:0000256|HAMAP-Rule:MF_01876};; TaxID=1287116 spec similarity UNIPROT
DB: UniProtKB
  • Identity: 82.0
  • Coverage: 305.0
  • Bit_score: 487
  • Evalue 1.20e-134
pseudouridine-5''''-phosphate glycosidase n=1 Tax=Hoeflea sp. 108 RepID=UPI0003660FA5 similarity UNIREF
DB: UNIREF100
  • Identity: 93.5
  • Coverage: 309.0
  • Bit_score: 550
  • Evalue 7.90e-154
indigoidine synthase A family protein similarity KEGG
DB: KEGG
  • Identity: 82.0
  • Coverage: 305.0
  • Bit_score: 486
  • Evalue 5.20e-135

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Taxonomy

Mesorhizobium sp. L2C084A000 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 939
ATGGAGATCAAGATGACGCTAGACACCGCCCGCCCCTATATCGACGTTCACGCACCGGTCGCCGCTGCCCTTGCCGCGGGCAAGCCGGTTGTGGCGCTCGAGAGCACCATCATCACCCACGGCATGCCCTATCCCGACAACAGCGCCATGGCCGCCAATGTCGAGAAGATCATCTCTGACGAGGGTGCGGTGCCGGCGACGATCGCCGTCATCGGCGGGCGCATCAAGATCGGCCTGTCGGACGGCGAACGCGAATCGCTGGCCATGACCGGCGGCGCAATGAAGCTGTCGCGCGCCGACATCGCCTATGCGGTTGCCGAAGGCCGCACCGGCGGCACCACGGTCGCGGCGACGATGATCGCGGCGCATCTTGCCGGCATCAAGGTGTTCGCCACCGGCGGCATCGGCGGTGTGCACAAGGGCGCCGAGAAGAGCTTCGACATCTCGGCCGACCTGGACGAACTCGCGCGCACGCCCGTCATCGTTGTTTCGGCCGGCGCCAAGGCCATCCTCGACATCGAAAAGACACTCGAAGTTCTGGAGACGCGGGGCGTGCCGGTCGTCGCCTACGATTCCGACATCGTCCCCGCCTTCTGGTCGCGCAAGTCGCCCTACTCGGCCCCGCTCCGGCTGGATTCGGCCGGCAAGATCGCCCGGCTCTACCAGATGCGCGCCGCGCTCGGCCTCGACGGCGGCATGCTGGTGGCAAATCCCGTGCCCGAGAGCGACGAGATCCCGGCCGACAAGATGGCCGGCTACATCGAAGCGGCGCAGAAGGCAGCCGAGGCCCAGAACATTTCGGGCAAGGCGGTGACGCCGTTCCTGCTGGCGAAGATCCTCGAACTGACCAACGGCGCCAGCCTCAAGACCAACATCGCGCTGGTCGAGAACAACGCGAGGCTGGCGGCAAAGGTAGCGATCGAACTGGCCAAGGCCTGA
PROTEIN sequence
Length: 313
MEIKMTLDTARPYIDVHAPVAAALAAGKPVVALESTIITHGMPYPDNSAMAANVEKIISDEGAVPATIAVIGGRIKIGLSDGERESLAMTGGAMKLSRADIAYAVAEGRTGGTTVAATMIAAHLAGIKVFATGGIGGVHKGAEKSFDISADLDELARTPVIVVSAGAKAILDIEKTLEVLETRGVPVVAYDSDIVPAFWSRKSPYSAPLRLDSAGKIARLYQMRAALGLDGGMLVANPVPESDEIPADKMAGYIEAAQKAAEAQNISGKAVTPFLLAKILELTNGASLKTNIALVENNARLAAKVAIELAKA*