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cn_combo_scaffold_4666_13

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(10297..10650)

Top 3 Functional Annotations

Value Algorithm Source
RNA signal recognition particle 4.5S RNA n=1 Tax=Hoeflea sp. 108 RepID=UPI000365CC66 similarity UNIREF
DB: UNIREF100
  • Identity: 75.2
  • Coverage: 117.0
  • Bit_score: 193
  • Evalue 9.20e-47
RNA signal recognition particle 4.5S RNA {ECO:0000313|EMBL:ESW81555.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source=" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.8
  • Coverage: 117.0
  • Bit_score: 192
  • Evalue 2.90e-46
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 74.4
  • Coverage: 117.0
  • Bit_score: 186
  • Evalue 5.40e-45

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Taxonomy

Mesorhizobium sp. LSJC280B00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 354
ATGACTTATGTCGACGGTTTCGTGCTCGCAGTGCCAAAAGCCAAGATCGAGGCCTACAAGGCCCAGGCCAGGACTGGCAGCGAGGTGTGGAAGGATCACGGTGCGCTCGCCTATGTCGAGTGCATCGGCGACGACGTGCCCTATGGTGAGCTGACCTCCTTCCCGCGTGCCGTGCAGGCCAAGGACGACGAGGTCGTGATCTTCTCCTGGGTCCTCTACCGTTCACGCGCCGATCGCGACGAGATCATGAAGAAGGTGATGGCCGACCCGCGTCTCGACAGCGACCCCGCGTCCTGGGCCTTCGACGGCAAGCGCATGATCTTCGGCGGCTTCGAGGCATTCATCGAAGTCTAG
PROTEIN sequence
Length: 118
MTYVDGFVLAVPKAKIEAYKAQARTGSEVWKDHGALAYVECIGDDVPYGELTSFPRAVQAKDDEVVIFSWVLYRSRADRDEIMKKVMADPRLDSDPASWAFDGKRMIFGGFEAFIEV*