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cn_combo_scaffold_7951_8

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(5847..6857)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 98.2
  • Coverage: 336.0
  • Bit_score: 647
  • Evalue 1.20e-182
DNA-directed RNA polymerase subunit alpha n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EPU9_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 98.2
  • Coverage: 336.0
  • Bit_score: 647
  • Evalue 8.70e-183
DNA-directed RNA polymerase subunit alpha similarity KEGG
DB: KEGG
  • Identity: 97.9
  • Coverage: 336.0
  • Bit_score: 645
  • Evalue 9.30e-183

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Taxonomy

Mesorhizobium metallidurans → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1011
ATGATTCAGAAAAACTGGCAGGAACTGATCAAGCCGAACAAGATCGAGTTCTCGTCAAAGAAGAAGACGCTGACCACGCTGGTGGCCGAGCCGCTCGAGCGTGGCTTCGGCCTGACGCTGGGCAATGCTCTGCGCCGTGTGCTGCTGTCGTCGCTGCGCGGCGCTGCCGTCACCGCCGTCCAGATCGACGGCGTGCTGCACGAGTTCTCGTCGATCGGCGGCGTCCGCGAGGACGTGACCGACATCGTGCTGAACATCAAGGAAATCGCTATCCGCATGGAAGGCGATGGTCCGAAGCGCATGGTCGTTCGCAAGCAGGGCCCGGGTGCGGTGCTCGCCGGCGACATCCAGACCGTGGGCGACGTCGAGATCCTGAACCCCGACCACGTGATCTGCACCCTCGACGAGGGCGCCGAGATCCGCATGGAGTTCACGGTCGACACCGGCAAGGGCTACGTTCCTGCCGAGCGCAACCGCGCGGAAGACGCTCCGATCGGGCTCATCCCGGTCGACAGCCTCTACTCGCCGGTCAAGAAGGTTTCGTACAAGGTCGAGAACACCCGTGAGGGCCAGGTTCTGGACTACGACAAGCTGACCATGACCATCGAGACCGACGGTTCGATCACGGGCGAGGACGCGGTGGCTTTCGCTGCCCGCATCCTGCAGGACCAGCTTGCGCTGTTCGTTAACTTCGAGGAGCCCCAGAAGGAAGCCGCGGCCGAGCAGGTCACGGAACTCGCCTTCAACCCGGCGCTGCTCAAGAAGGTCGACGAGCTCGAGCTTTCGGTGCGTTCGGCCAACTGCCTCAAGAACGACAACATCGTTTACATCGGCGACCTGATCCAGAAGACGGAAGCCGAGATGTTGCGCACCCCGAATTTCGGCCGCAAGTCGCTCAACGAGATCAAGGAAGTTCTGGCCGCTATGGGTCTGCACCTCGGTATGGAAGTGCAGGACTGGCCGCCGGAAAACATCGAAGACCTCGCCAAGCGTTACGAAGACCAGTACTAA
PROTEIN sequence
Length: 337
MIQKNWQELIKPNKIEFSSKKKTLTTLVAEPLERGFGLTLGNALRRVLLSSLRGAAVTAVQIDGVLHEFSSIGGVREDVTDIVLNIKEIAIRMEGDGPKRMVVRKQGPGAVLAGDIQTVGDVEILNPDHVICTLDEGAEIRMEFTVDTGKGYVPAERNRAEDAPIGLIPVDSLYSPVKKVSYKVENTREGQVLDYDKLTMTIETDGSITGEDAVAFAARILQDQLALFVNFEEPQKEAAAEQVTELAFNPALLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKSLNEIKEVLAAMGLHLGMEVQDWPPENIEDLAKRYEDQY*