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cn_combo_scaffold_4837_9

Organism: CN-SCN_Phenylobacterium_14x

near complete RP 44 / 55 MC: 2 BSCG 42 / 51 MC: 2 ASCG 7 / 38
Location: comp(6944..7195)

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding protein Hfq n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RBU0_PHEZH similarity UNIREF
DB: UNIREF100
  • Identity: 95.0
  • Coverage: 80.0
  • Bit_score: 158
  • Evalue 2.30e-36
hfq; RNA-binding protein Hfq; K03666 host factor-I protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 97.5
  • Coverage: 80.0
  • Bit_score: 162
  • Evalue 2.90e-37
hfq; RNA-binding protein Hfq similarity KEGG
DB: KEGG
  • Identity: 95.0
  • Coverage: 80.0
  • Bit_score: 158
  • Evalue 6.50e-37

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Taxonomy

R_Phenylobacterium_69_31 → Caulobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 252
ATGTCCGGCAACGACAAGAAACAGAACCTCCAGGACACGTTCCTGAACAGCGTGCGCAAGTCGAAGACGCCGCTGACGATCTTCCTGGTGAACGGCGTGAAGCTGCAGGGCGTCGTGAGCTGGTTCGACAATTTCTGCGTGCTGCTGCGCCGCGACGGCCAGTCGCAACTGGTCTACAAGCACGCCATTTCCACCATCATGCCGGCTCAGCCCGTTCAGCTCTATGAGCCGGCGGAAGACGAGGGCGATTGA
PROTEIN sequence
Length: 84
MSGNDKKQNLQDTFLNSVRKSKTPLTIFLVNGVKLQGVVSWFDNFCVLLRRDGQSQLVYKHAISTIMPAQPVQLYEPAEDEGD*