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CN-SCN_Pseudonocardia_51x

CN-SCN_Pseudonocardia_dioxanivorans_72_52
In projects: CN-SCN

Consensus taxonomy: Pseudonocardia dioxanivorans  →  Pseudonocardia  →  Pseudonocardiales  →  Actinobacteria  →  Actinobacteria  →  Bacteria

Description

Partial 9

Displaying items 151-200 of 408 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
cn_combo_scaffold_7230 PSE51_170
Species: Pseudonocardia dioxanivorans (100%)
9 8472 bp 74.15 51.94 95.64
cn_combo_scaffold_11968 PSE51_309
Class: Actinobacteria (66.67%)
6 5325 bp 69.58 51.98 79.47
cn_combo_scaffold_292 PSE51_3
Species: Pseudonocardia dioxanivorans (51.69%)
118 106520 bp 73.22 52.01 88.32
cn_combo_scaffold_3769 PSE51_54
Species: Pseudonocardia dioxanivorans (92.31%)
13 15336 bp 73.26 52.03 89.81
cn_combo_scaffold_4135 PSE51_65
Species: Pseudonocardia dioxanivorans (84.62%)
13 14157 bp 73.12 52.03 93.69
cn_combo_scaffold_3856 PSE51_386
Class: Actinobacteria (71.43%)
14 15062 bp 68.99 52.10 77.98
cn_combo_scaffold_2403 PSE51_25
Species: Pseudonocardia dioxanivorans (94.12%)
34 38357 bp 73.27 52.10 91.23
cn_combo_scaffold_14213 PSE51_401
Class: Actinobacteria (90%)
10 6976 bp 72.42 52.14 96.04
cn_combo_scaffold_934 PSE51_7
Species: Pseudonocardia dioxanivorans (71.11%)
45 51529 bp 72.71 52.16 91.37
cn_combo_scaffold_11343 PSE51_283
Species: Pseudonocardia dioxanivorans (100%)
6 5607 bp 73.14 52.17 94.97
cn_combo_scaffold_9942 PSE51_243
Species: Pseudonocardia dioxanivorans (85.71%)
7 6803 bp 73.75 52.20 91.15
cn_combo_scaffold_7076 PSE51_163
Species: Pseudonocardia dioxanivorans (72.22%)
18 15594 bp 73.15 52.23 79.29
cn_combo_scaffold_8665 PSE51_201
Species: Pseudonocardia dioxanivorans (88.89%)
9 8306 bp 74.30 52.23 91.05
cn_combo_scaffold_11353 PSE51_285
Species: Pseudonocardia dioxanivorans (50%)
8 5600 bp 73.52 52.23 88.18
cn_combo_scaffold_365 PSE51_4
Order: Pseudonocardiales (56.52%)
92 94926 bp 73.16 52.24 90.54
cn_combo_scaffold_2909 PSE51_32
Species: Pseudonocardia dioxanivorans (77.27%)
22 31487 bp 73.84 52.25 90.05
cn_combo_scaffold_11766 PSE51_296
Species: Pseudonocardia dioxanivorans (100%)
6 5415 bp 73.07 52.26 93.30
cn_combo_scaffold_3970 PSE51_59
Species: Pseudonocardia dioxanivorans (84%)
25 19661 bp 73.73 52.26 84.74
cn_combo_scaffold_8321 PSE51_190
Species: Pseudonocardia dioxanivorans (100%)
9 7504 bp 72.80 52.27 91.79
cn_combo_scaffold_5708 PSE51_122
Species: Pseudonocardia dioxanivorans (75%)
20 16929 bp 72.53 52.27 90.89
cn_combo_scaffold_6235 PSE51_140
Species: Pseudonocardia dioxanivorans (60%)
10 9659 bp 73.93 52.28 94.54
cn_combo_scaffold_8089 PSE51_187
Species: Pseudonocardia dioxanivorans (100%)
7 7686 bp 74.20 52.28 93.29
cn_combo_scaffold_12562 PSE51_335
Species: Pseudonocardia dioxanivorans (85.71%)
7 8178 bp 75.14 52.29 96.15
cn_combo_scaffold_6230 PSE51_139
Species: Pseudonocardia dioxanivorans (88.89%)
9 10226 bp 72.85 52.33 93.88
cn_combo_scaffold_5320 PSE51_102
Species: Pseudonocardia dioxanivorans (100%)
11 11117 bp 74.15 52.33 94.94
cn_combo_scaffold_12942 PSE51_346
Domain: Bacteria (66.67%)
9 8851 bp 60.22 52.34 81.01
cn_combo_scaffold_5161 PSE51_98
Species: Pseudonocardia dioxanivorans (92.31%)
13 11425 bp 72.51 52.38 86.10
cn_combo_scaffold_9794 PSE51_240
Species: Pseudonocardia dioxanivorans (100%)
4 6440 bp 74.08 52.39 88.56
cn_combo_scaffold_9558 PSE51_232
Species: Pseudonocardia dioxanivorans (57.14%)
7 8239 bp 73.22 52.40 92.12
cn_combo_scaffold_2906 PSE51_31
Species: Pseudonocardia dioxanivorans (57.14%)
28 19451 bp 74.61 52.41 93.06
cn_combo_scaffold_4395 PSE51_73
Species: Pseudonocardia dioxanivorans (76.92%)
13 13329 bp 73.34 52.41 92.84
cn_combo_scaffold_4274 PSE51_70
Species: Pseudonocardia dioxanivorans (100%)
13 13706 bp 74.95 52.42 90.44
cn_combo_scaffold_15136 PSE51_357
Species: Pseudonocardia dioxanivorans (100%)
7 6721 bp 72.98 52.42 89.41
cn_combo_scaffold_9225 PSE51_219
Species: Pseudonocardia dioxanivorans (71.43%)
7 6818 bp 73.13 52.43 91.17
cn_combo_scaffold_16068 PSE51_402
Class: Actinobacteria (66.67%)
6 5426 bp 69.06 52.43 98.14
cn_combo_scaffold_10321 PSE51_253
Species: Pseudonocardia dioxanivorans (100%)
7 6138 bp 72.63 52.43 89.05
cn_combo_scaffold_9315 PSE51_224
Species: Pseudonocardia dioxanivorans (100%)
6 6740 bp 74.54 52.46 90.76
cn_combo_scaffold_6022 PSE51_131
Species: Pseudonocardia dioxanivorans (69.23%)
13 9963 bp 73.84 52.46 89.94
cn_combo_scaffold_8823 PSE51_205
Species: Pseudonocardia dioxanivorans (100%)
8 7133 bp 72.87 52.47 88.45
cn_combo_scaffold_10866 PSE51_267
Species: Pseudonocardia dioxanivorans (87.5%)
8 5832 bp 73.37 52.47 85.34
cn_combo_scaffold_4719 PSE51_86
Species: Pseudonocardia dioxanivorans (100%)
10 12438 bp 73.76 52.48 87.63
cn_combo_scaffold_3500 PSE51_49
Species: Pseudonocardia dioxanivorans (100%)
16 16387 bp 73.39 52.50 85.93
cn_combo_scaffold_4728 PSE51_87
Species: Pseudonocardia dioxanivorans (52.63%)
19 12420 bp 73.24 52.52 90.28
cn_combo_scaffold_3461 PSE51_48
Species: Pseudonocardia dioxanivorans (92.31%)
13 16619 bp 72.94 52.54 92.62
cn_combo_scaffold_1718 PSE51_11
Order: Pseudonocardiales (58.82%)
17 32749 bp 74.28 52.56 96.47
cn_combo_scaffold_14062 PSE51_354
Species: Pseudonocardia dioxanivorans (90%)
10 6619 bp 73.49 52.56 93.05
cn_combo_scaffold_7195 PSE51_167
Species: Pseudonocardia dioxanivorans (83.33%)
12 11166 bp 73.22 52.59 93.34
cn_combo_scaffold_11095 PSE51_276
Species: Pseudonocardia dioxanivorans (100%)
4 5731 bp 73.84 52.59 99.04
cn_combo_scaffold_5700 PSE51_120
Species: Pseudonocardia dioxanivorans (81.82%)
11 10473 bp 73.59 52.59 90.00
cn_combo_scaffold_9528 PSE51_231
Species: Pseudonocardia dioxanivorans (100%)
12 9843 bp 71.87 52.60 83.30
Displaying items 151-200 of 408 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.