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cn_combo_scaffold_5960_5

Organism: CN-SCN_Rhodospirillales_16x

near complete RP 42 / 55 BSCG 41 / 51 ASCG 9 / 38
Location: comp(3300..4025)

Top 3 Functional Annotations

Value Algorithm Source
Putative alanine/threonine--tRNA ligase n=1 Tax=Variovorax paradoxus B4 RepID=T1XBL9_VARPD similarity UNIREF
DB: UNIREF100
  • Identity: 64.4
  • Coverage: 233.0
  • Bit_score: 314
  • Evalue 9.60e-83
putative alanine/threonine--tRNA ligase Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 76.6
  • Coverage: 239.0
  • Bit_score: 379
  • Evalue 2.60e-102
putative alanine/threonine--tRNA ligase similarity KEGG
DB: KEGG
  • Identity: 64.4
  • Coverage: 233.0
  • Bit_score: 314
  • Evalue 2.70e-83

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Taxonomy

R_Alphaproteobacteria_66_14 → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 726
ATGCACCCTTTTTGCCACGAACACCCCGATACCCTCGTCGTCGAGACCACCGTTACCGATGCACGGCCAGGCAAGGTCGCGCTGGCGCAGTCGCCTTTCTACCCCGGCGGCGGCGGGCAGCTTGCCGACCGCGGTACTGTCCGCTGGAGTGGTGGTGAGGCCAAAGTAACTGGCTTCGAGCTCTCCGCCGGGAAGGTCTGGCTTCTGTTCGACGAGCAAGCCGAGGTCTCGGGCACTGTCGAAGCGATGGTCGACAGCGATTTTCGCCGCATGATGCGCCAGCTTCACACCGACACACATGTCTTGAACGCGCTGGTCTTCCAGCAGTTTGATGGCGCGCTGGTGACGGGCGTGCAGATGGCCGAGGACGGCACGGCGCGCATGGATTTCGACTTGCAGGGAGCTGACAACGAACGCCTGCGCGCGCTTGAAGGCCCGATGAACGATCTCATTCGCCAGGACATCGCCGTATCGACCGCCTATGTGCCAATGCACGAGGCTCATGCCGAGCACGGCCTGATCCGCAGCCGTTCGGTGGCGCCGCCACCGACGCCGGATGGCAAGATCCGCATCGTCGAGATTGCCGGCCTCGACCGCCAGGCTTGCGGGGGTACGCACCTAACTTCGACAGGGGGGTCACTGCCGGTCCGCATCCTCAAGATCGACAACAAGGGCCGCCACAACCGCAGGGTCCGCATCGGCCTGTCAGACGCCAGGGATCCCTGA
PROTEIN sequence
Length: 242
MHPFCHEHPDTLVVETTVTDARPGKVALAQSPFYPGGGGQLADRGTVRWSGGEAKVTGFELSAGKVWLLFDEQAEVSGTVEAMVDSDFRRMMRQLHTDTHVLNALVFQQFDGALVTGVQMAEDGTARMDFDLQGADNERLRALEGPMNDLIRQDIAVSTAYVPMHEAHAEHGLIRSRSVAPPPTPDGKIRIVEIAGLDRQACGGTHLTSTGGSLPVRILKIDNKGRHNRRVRIGLSDARDP*