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cn_combo_scaffold_8529_5

Organism: CN-SCN_Rhodospirillales_16x

near complete RP 42 / 55 BSCG 41 / 51 ASCG 9 / 38
Location: comp(6083..7327)

Top 3 Functional Annotations

Value Algorithm Source
RNAse E; K08300 ribonuclease E [EC:3.1.26.12] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 82.8
  • Coverage: 418.0
  • Bit_score: 638
  • Evalue 5.40e-180
Ribonuclease E n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z8H4_AZOL4 similarity UNIREF
DB: UNIREF100
  • Identity: 60.0
  • Coverage: 428.0
  • Bit_score: 466
  • Evalue 3.40e-128
rne; Ribonuclease E similarity KEGG
DB: KEGG
  • Identity: 60.0
  • Coverage: 428.0
  • Bit_score: 466
  • Evalue 9.60e-129

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Taxonomy

R_Alphaproteobacteria_66_14 → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1245
ACTGCCGGCCTCGAACGGAGCACCATCGATATCAAGCGCGACTACGAATATCTGTCGCGCCTCTGGGATTCGATCCGCGAACTCACCATGCGCTCGACGGCGCCGGCGCTGATCTACGAAGAGGGCGACCTCATCAAGCGCTCGCTGCGCGACGTCTACGACACCGACATCGCCCAGGTTCTGGTCGAGGGCGAAGCAGGCTTCCAAGCGGCGTCCGAGTTCATGCGGCAGCTCGTGCCGCACCAGGCCAACAAGGTCGAGCTTTACCGGGAGCCGATTCCCCTCTTCCACCGCTATCAGGTGGAGAACCAGTTCGACGCCATGCATTCGCCGACGGTGCAGCTGCGCTCCGGCGGCTACATCGTGATCAATCCGACCGAGGCGCTGGTCGCCATCGACGTCAACTCGGGCCGCTCGACGAAGGAGCGCAACATCGAGGAGACGGCGGTCCGGACCAACATCGAGGCGGCCGAGGAAATCGCCCGCCAGGTCCGCCTACGCGACCTTGCCGGCCTGATCGTGATCGACTTCATCGACATGGAGGAGACGCGCCACCAGCGCCAGGTCGAGCACAAGGTGAAGGATGCGATGCGCAACGACCGCGCCCGCATCCAGATCGGCCGCATCTCCGCCTTCGGCCTGCTCGAGATGTCGCGCCAGCGGCTGCGGCCCAGCCTGCTCGAACACTCCACCGAAATCTGCCCGCATTGCGCCGGCACGGGCCGCGTCCGCTCGATCGAGTCGGCCGCGCTGCATGCGTTGCGTGCCATCGAGGAAGAAGGCGTGCGGCGGCGGGCGAGCGAAATCCTGGTCAGCCTGCCGCCGAACGTGGCGCTCTACCTGCTCAACCAAAAGCGGCACACGCTCAGCGAAATCGAGAACCGCTACAACTTCCATGTCACGATCGAGGCCGACGACGAGCTGCACGCGGCGGACTGCGAGATCGAACGCGTGCGGTCGCGCCGCGAAGACCGCGGCGAGCGCCCGGCCCAGGAGCTGGCACGTGCCAGCTACGAGGAAGCTTCGGGTGAGGCTGCCCCGGCCGATCAGGAAGACGAGACGGAGAGCCGTGGCGACAGCGAGGATCGTGGCGAGGAGCGCAGTGCCGACGACGAAAATGGTCGCGGCCGTGGCCGTCGCCGCCGTCGTCGCCGTCGCGGTCGTCGCGACGGTGAGGGCGAGGAGTCCGATCGTCCGCGCCTTGCCGGCGAAGAAGGCGCCAGTGACGAATCGCGCGACGAATAG
PROTEIN sequence
Length: 415
TAGLERSTIDIKRDYEYLSRLWDSIRELTMRSTAPALIYEEGDLIKRSLRDVYDTDIAQVLVEGEAGFQAASEFMRQLVPHQANKVELYREPIPLFHRYQVENQFDAMHSPTVQLRSGGYIVINPTEALVAIDVNSGRSTKERNIEETAVRTNIEAAEEIARQVRLRDLAGLIVIDFIDMEETRHQRQVEHKVKDAMRNDRARIQIGRISAFGLLEMSRQRLRPSLLEHSTEICPHCAGTGRVRSIESAALHALRAIEEEGVRRRASEILVSLPPNVALYLLNQKRHTLSEIENRYNFHVTIEADDELHAADCEIERVRSRREDRGERPAQELARASYEEASGEAAPADQEDETESRGDSEDRGEERSADDENGRGRGRRRRRRRRGRRDGEGEESDRPRLAGEEGASDESRDE*