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cn_combo_scaffold_11746_1

Organism: CN-SCN_Rhodospirillales_16x

near complete RP 42 / 55 BSCG 41 / 51 ASCG 9 / 38
Location: 3..527

Top 3 Functional Annotations

Value Algorithm Source
ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=1 Tax=Pseudomonas sp. GM80 RepID=J2Y9W0_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 71.3
  • Coverage: 174.0
  • Bit_score: 271
  • Evalue 5.20e-70
ABC transporter permease {ECO:0000313|EMBL:KHA71877.1}; TaxID=587753 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas chlor similarity UNIPROT
DB: UniProtKB
  • Identity: 71.3
  • Coverage: 174.0
  • Bit_score: 271
  • Evalue 7.20e-70
binding-protein-dependent transport system inner membrane protein similarity KEGG
DB: KEGG
  • Identity: 70.1
  • Coverage: 174.0
  • Bit_score: 270
  • Evalue 4.20e-70

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Taxonomy

Pseudomonas chlororaphis → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 525
TGGGTCGGCGGCTCCGGGCGGGTCGACATCTTCTATCTCGACGCCGTGCCGCGTCGGACGGGCATGCTGCTGGTCGATTCCCTGCTGGCCGGCGACTGGGACGTCTTCGTCAGTGCGTTCAGGCACATCATCCTGCCGGCGCTCCTGCTCGGCTATTCCTCGATGGCCTATATCAGCCGCATGACCCGCAGCTTCATGCTCGACCAGCTCGGGCAGGAATATGTCACCACGGCGCGGGTCAAGGGGCTGTCGCGGCGGCGCGTGGTCTGGGGCCATGCCTTCCGCAACGTGCTGGTCCAGCTCGCGACCATCGTCGCGATTTCCTATGGCGGGCTGCTCGAAGGGGCGGTGCTCACCGAGACGGTCTTCGCCTGGCCCGGCTTTGGCCAGTACCTGACCACCGCGCTGATGATCGGCGACATGAACGCTGTGCTCGCCTGCATGCTCATCGTCGGGCTGGTCTTCATCTGCCTGAACCTGATCACCGACCTCCTCTATCGCTTCCTGGACCCGCGCACCCGATGA
PROTEIN sequence
Length: 175
WVGGSGRVDIFYLDAVPRRTGMLLVDSLLAGDWDVFVSAFRHIILPALLLGYSSMAYISRMTRSFMLDQLGQEYVTTARVKGLSRRRVVWGHAFRNVLVQLATIVAISYGGLLEGAVLTETVFAWPGFGQYLTTALMIGDMNAVLACMLIVGLVFICLNLITDLLYRFLDPRTR*