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CN-SCN_Thiobacillus_729x

CN-SCN_Hydrogenophilales_62_727
In projects: CN-SCN

Consensus taxonomy: Hydrogenophilales  →  Betaproteobacteria  →  Proteobacteria  →  Bacteria

Metagenomic Context

Parent: CN-SCN_Unknown

Properties

Avg. coverage: 727.26 Longest contig: 44.29 Kbp Bin length: 887.78 Kbp GC content: 61.86 %
Contigs count: 83 Features count: 995 rRNAs count: 0 tRNAs count: 7

Genome completeness

partial RP 25 / 55 BSCG 24 / 51 ASCG 3 / 38 MC: 1

Description

Partial 25

Displaying items 1-50 of 83 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
cn_combo_scaffold_22056 THIO756_73
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (66.67%)
9 5432 bp 60.75 679.99 75.88
cn_combo_scaffold_13693 THIO756_48
Order: Hydrogenophilales (50%)
8 5836 bp 58.60 702.74 76.18
cn_combo_scaffold_16086 THIO756_58
Order: Hydrogenophilales (60%)
5 5085 bp 61.77 908.63 76.22
cn_combo_scaffold_9766 THIO756_32
Class: Betaproteobacteria (85.71%)
7 7714 bp 59.70 710.09 77.90
cn_combo_scaffold_19141 THIO756_67
Order: Hydrogenophilales (71.43%)
7 5574 bp 61.91 740.49 78.63
cn_combo_scaffold_31838 THIO756_80
Class: Betaproteobacteria (57.14%)
7 5497 bp 62.83 637.04 79.30
cn_combo_scaffold_11945 THIO756_39
Order: Hydrogenophilales (81.25%)
16 15895 bp 61.64 722.43 79.86
cn_combo_scaffold_20556 THIO756_70
Phylum: Proteobacteria (75%)
8 5425 bp 59.47 642.23 80.13
cn_combo_scaffold_7810 THIO756_22
Order: Hydrogenophilales (55.56%)
9 7918 bp 61.38 740.29 80.63
cn_combo_scaffold_8029 THIO756_24
Class: Betaproteobacteria (86.67%)
15 10259 bp 63.11 686.42 81.41
cn_combo_scaffold_19374 THIO756_68
Order: Hydrogenophilales (69.23%)
13 7026 bp 59.65 689.23 82.19
cn_combo_scaffold_11962 THIO756_82
Phylum: Proteobacteria (55.56%)
9 6641 bp 62.97 648.59 82.64
cn_combo_scaffold_16573 THIO756_59
Phylum: Proteobacteria (77.78%)
9 7186 bp 64.40 659.89 83.08
cn_combo_scaffold_7913 THIO756_23
Class: Betaproteobacteria (73.91%)
23 24540 bp 60.04 893.05 83.34
cn_combo_scaffold_11264 THIO756_36
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (66.67%)
6 6324 bp 59.60 644.05 84.06
cn_combo_scaffold_31221 THIO756_79
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (66.67%)
6 5163 bp 62.75 784.83 84.72
cn_combo_scaffold_36256 THIO756_81
Order: Hydrogenophilales (88.89%)
9 5799 bp 60.53 720.26 85.26
cn_combo_scaffold_20133 THIO756_69
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (62.5%)
8 7118 bp 63.68 781.47 85.77
cn_combo_scaffold_12330 THIO756_41
Order: Hydrogenophilales (66.67%)
3 5185 bp 57.69 719.94 85.92
cn_combo_scaffold_9816 THIO756_31
Class: Betaproteobacteria (75%)
8 6433 bp 60.52 640.37 85.95
cn_combo_scaffold_15871 THIO756_56
Phylum: Proteobacteria (75%)
8 5211 bp 60.76 682.69 86.82
cn_combo_scaffold_4793 THIO756_6
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (60%)
10 12293 bp 64.44 799.67 87.44
cn_combo_scaffold_8103 THIO756_26
Order: Hydrogenophilales (52.38%)
21 20189 bp 60.80 650.51 87.52
cn_combo_scaffold_12013 THIO756_40
Class: Betaproteobacteria (66.67%)
6 5305 bp 62.96 844.96 87.65
cn_combo_scaffold_23644 THIO756_75
Order: Hydrogenophilales (62.5%)
8 6734 bp 63.93 787.85 87.78
cn_combo_scaffold_3077 THIO756_3
Order: Hydrogenophilales (87.5%)
16 18467 bp 59.99 691.58 88.31
cn_combo_scaffold_15487 THIO756_54
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (70%)
10 9655 bp 64.13 785.00 88.71
cn_combo_scaffold_21073 THIO756_71
Species: GWE1_Thiobacillus_62_9_curated (62.5%)
8 7122 bp 62.69 805.86 88.96
cn_combo_scaffold_27707 THIO756_77
Order: Hydrogenophilales (90.91%)
11 6077 bp 67.90 754.04 89.16
cn_combo_scaffold_4582 THIO756_5
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (69.23%)
13 15264 bp 63.48 780.08 89.25
cn_combo_scaffold_12644 THIO756_45
Species: GWE1_Thiobacillus_62_9_curated (50%)
10 8240 bp 62.71 759.31 89.42
cn_combo_scaffold_23724 THIO756_76
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (53.85%)
13 9935 bp 60.73 777.20 89.56
cn_combo_scaffold_10118 THIO756_33
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (78.57%)
14 10056 bp 62.83 719.41 89.77
cn_combo_scaffold_6227 THIO756_11
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (56.25%)
16 15918 bp 63.74 793.95 89.80
cn_combo_scaffold_11306 THIO756_37
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (55.56%)
9 10537 bp 64.03 618.16 90.37
cn_combo_scaffold_23309 THIO756_74
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (66.67%)
12 7787 bp 62.58 786.19 90.51
cn_combo_scaffold_15890 THIO756_57
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (54.55%)
11 7216 bp 66.70 655.17 90.72
cn_combo_scaffold_16964 THIO756_63
Order: Hydrogenophilales (100%)
7 6250 bp 62.02 607.30 91.06
cn_combo_scaffold_8059 THIO756_27
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (57.89%)
19 15276 bp 64.82 791.76 91.14
cn_combo_scaffold_8043 THIO756_25
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (69.57%)
23 15320 bp 61.29 722.17 91.33
cn_combo_scaffold_8782 THIO756_29
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (60%)
10 10529 bp 62.32 757.00 91.40
cn_combo_scaffold_30586 THIO756_78
Order: Hydrogenophilales (83.33%)
6 5035 bp 62.78 729.69 91.52
cn_combo_scaffold_5255 THIO756_8
Order: Hydrogenophilales (100%)
14 16068 bp 61.60 760.67 91.80
cn_combo_scaffold_10358 THIO756_34
Order: Hydrogenophilales (71.43%)
7 6977 bp 62.26 684.22 91.84
cn_combo_scaffold_8214 THIO756_28
Species: GWE1_Thiobacillus_62_9_curated (71.43%)
14 11600 bp 63.15 662.71 91.99
cn_combo_scaffold_6437 THIO756_13
Order: Hydrogenophilales (77.42%)
31 30949 bp 60.61 692.16 92.03
cn_combo_scaffold_7358 THIO756_18
Order: Hydrogenophilales (100%)
15 11426 bp 64.36 779.92 92.16
cn_combo_scaffold_7507 THIO756_19
Order: Hydrogenophilales (84.21%)
19 14652 bp 62.60 771.70 92.27
cn_combo_scaffold_6258 THIO756_12
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (64.71%)
17 13897 bp 62.47 748.02 92.29
cn_combo_scaffold_12642 THIO756_44
Species: Thiobacillus denitrificans (66.67%)
9 5311 bp 58.05 645.49 92.30
Displaying items 1-50 of 83 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.