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gwa2_scaffold_4255_46

Organism: GWA2_PER_43_8

near complete RP 44 / 55 MC: 1 BSCG 47 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: 50753..51577

Top 3 Functional Annotations

Value Algorithm Source
RpoD family RNA polymerase sigma-70 subunit, RNA polymerase primary sigma factor {ECO:0000313|EMBL:KKT02347.1}; TaxID=1619068 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacteriu UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 274.0
  • Bit_score: 539
  • Evalue 2.90e-150
RpoD family RNA polymerase sigma-70 subunit KEGG
DB: KEGG
  • Identity: 52.7
  • Coverage: 273.0
  • Bit_score: 268
  • Evalue 2.50e-69
RNA polymerase sigma factor similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 267
  • Evalue 3.00e+00

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Taxonomy

PER_GWF2_43_17 → Peregrinibacteria → Bacteria

Sequences

DNA sequence
Length: 825
ATGGTGCTTAATAGGTATTTGCGGAATATGGGACAAGTTTCTCGTTTAAATCGTGAGGATGAAATTGAAGTTGCGCGCAGAATTGCGGCGGGTGGACCGGATGCGGAAATAGCCAAACAAATTTTGATTAATGCGAATTTGAGATTGGTTGTCAGTATTGCGAAAAAATATATCGGTCGCAGATTGCCGTTGACCGATCTTATTCAGGAGGGGAATTTAGGTTTGATTAGAGCTGTGACAAAATTTGATTATAGAAGGGGCGTGAAATTCTCAACTTATGCGACTTGGTGGATTCGTCAGACAATCGTGAGGGCTATCGAGTCGCAAGCGAGGCACATTAGAATACCTCCATATAAACTTGAAGTTGTTAATAAGATTTATCGGGCGCGGGAAGAGTTATGTCGAAATTTGAGACGAGAGCCGACCAATAAGGAGATCGCCGACAAGCTTGAGATGGAGGCGGATGAGGTTAGTCAGTTTATGGTATGGGATCGCGGGGTCGTGTTTCTTGATGCGCCTATGGAAGAGGGTGGTCGGAATACGGTTGGAGATTTTGTTGAAGATTCGGATGCGGGAAAGGTTGATTTGGATTCCACGCAAGCGGAGTTGAGAGGTAATCTTGAGGAAGCTTTGTCGAAGCTTACGCCGGTGGAAGAAACCGTTACGAAGTTGCGGTTTGGGATAGGCGAGCCGTGTACATATTCTCTTGAGGAAATAGGGAAGCGGTTTCATTTGACTCGTGAAAGGATTCGTCAAATAGAAATGAAGGCTTTGCGTAAATTGAGGCATGAAAAACGAAGCAAAAATCTCAGGGTGTTTATTTAA
PROTEIN sequence
Length: 275
MVLNRYLRNMGQVSRLNREDEIEVARRIAAGGPDAEIAKQILINANLRLVVSIAKKYIGRRLPLTDLIQEGNLGLIRAVTKFDYRRGVKFSTYATWWIRQTIVRAIESQARHIRIPPYKLEVVNKIYRAREELCRNLRREPTNKEIADKLEMEADEVSQFMVWDRGVVFLDAPMEEGGRNTVGDFVEDSDAGKVDLDSTQAELRGNLEEALSKLTPVEETVTKLRFGIGEPCTYSLEEIGKRFHLTRERIRQIEMKALRKLRHEKRSKNLRVFI*