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gwc1_scaffold_6161_11

Organism: GWC1_Archaea_31_11

partial RP 27 / 55 MC: 1 BSCG 11 / 51 ASCG 25 / 38
Location: comp(6422..7075)

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated UNIPROT
DB: UniProtKB
  • Identity: 42.6
  • Coverage: 188.0
  • Bit_score: 151
  • Evalue 1.40e-33
RNA polymerase subunit sigma-24 KEGG
DB: KEGG
  • Identity: 37.4
  • Coverage: 198.0
  • Bit_score: 123
  • Evalue 6.10e-26
RNA polymerase, sigma-24 subunit, ECF subfamily similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 119
  • Evalue 8.00e+00

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Taxonomy

RIFOXYB12_FULL_Lentisphaerae_65_16_curated → Lentisphaerae → Bacteria

Sequences

DNA sequence
Length: 654
ATGGAAAAATTAACTGCAGAACAATTTTCAGGACCATATTGGGAATCTGAAGAAGCGCAACTATATAGAGAAATGTTAGAACATCCTGAAGACGGAAGAGTTGCATTTGAAAAAATTTATAATGGACAAAGAAAAAGAGCATATCAAATTGCCTACGGAATTTTAAGAAATCGTCAAGATGCGCAAGAAGTTACTCAAGATATAATGAGGAGTATCTGGAGAAGCGCTCACGAAGAAAGTGGAAGATTTAGAGGAAATTCAGAATTTTCAACTTGGTTTTACCGCATTGCATCTAATTTAGCAAGAAATAAATATTATTGGAATAAATCAAGGGGCTCGCAAAGAGATGTTTCTCTTGACGAACTTCTTTCACAAAAAGATGAAGAAGGGAGAAATTTCACATTGGGGGTTATTGATGATAAATCATTAAGTCCAGCAGAAGAAGCAGAGCTTGATGAATTAGGAAAACAGGCCTTAAAAGAATTAGAAAAACTTCCAGGACATTATAGACAGGCATTAATTTTAGAACATGTTAACAAAAAAAGTCATAAAGAAATTTCAGAATTGTTAAGAATTCCAATAGGAACAGTAAAATCAAGAATCGCCCGCGCAAGAGCAAAGTTAAGAAAAGTTGCGAATTGTAAAGTTTTTTAA
PROTEIN sequence
Length: 218
MEKLTAEQFSGPYWESEEAQLYREMLEHPEDGRVAFEKIYNGQRKRAYQIAYGILRNRQDAQEVTQDIMRSIWRSAHEESGRFRGNSEFSTWFYRIASNLARNKYYWNKSRGSQRDVSLDELLSQKDEEGRNFTLGVIDDKSLSPAEEAELDELGKQALKELEKLPGHYRQALILEHVNKKSHKEISELLRIPIGTVKSRIARARAKLRKVANCKVF*