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gwa2_scaffold_4002_18

Organism: GWA2_OD1_45_39_plus

near complete RP 40 / 55 MC: 2 BSCG 42 / 51 MC: 1 ASCG 10 / 38 MC: 1
Location: comp(17682..21572)

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
rpoC; DNA-directed RNA polymerase, beta' subunit (EC:2.7.7.6) KEGG
DB: KEGG
  • Identity: 48.4
  • Coverage: 999.99
  • Bit_score: 1191
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta {ECO:0000313|EMBL:KKU07501.1}; TaxID=1619041 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Magasanikbacteria) bacterium GW2011_GWA2_45_39.;" UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 999.99
  • Bit_score: 2533
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 1184
  • Evalue 0.0

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Taxonomy

GWA2_OD1_45_39_plus → Magasanikbacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 3891
ATGTTTAAAGAACCTCAAGCTGTATTTGACGCCATGCGCCTCAACATTGCGTCTCCTGGTCGTATAAAAGAATGGTCTTATGGTGAAGTTTCAAAGCCTGAAACCATCAATTATCGTACTCAAAAACCGGAAAAGGGCGGTCTTTTTGCTGAAGAAATTTTTGGCCCCACAAAAGATTGGGAATGTTACTGCGGAAAATACAAAAAAATCCGTTATAAAGGAATTATTTGTGATAAGTGTGGCGTGGAAGTAACCCATTCGCTGGTGCGCCGGGAACGCATGGGCCATATTGATTTGGCGGTTCCAGTGGCTCACATTTGGTTTTTAAGAAGTATTCCTTCTAAGATCGGCACGGTGTTGGACATGTCAATTTTAGCTTTGGAGAAGGTGGTATATTTTAACAATTTCATCATCACACACGTTGATGAAAATTTAAAAGTTCAGACACACGAACAGTTAAAAGCGGAATATAAATCAAAACTGAAAGCCTTACAAAATGAACACAAGCGAAAACTTGAGGAGATAAGTATTAGAGCCGGAGCAGACGCATCTCATTTTATGGAAAAAGCAGCCACGGAACATGATCGTAAGGTGGTGGCGTTGGATGCGGATTTTATGGCCGCGGAAAAAGAATTAAAAGAGTTGACTTTATTGAATTTATTGACTGAAAACGAATATCGCGAATATTCTTTGCGCTACGGACACTTGTTTGATGCAGGTATTGGAGCGGAAGCAATCCGCGAGCTGTTGGGCAAAATTGATTTGTCCGCTACCATTAAAAAATTGGAAGAAGATGCCACTGACGCGCCGCCTGCCCGCCGTGAACGCATGATCCGTCGTTTGAAACTTTTGAAAAGCATGAATCAGAACAGAATCGAGCCGGAGTGGATGGTTATGACGGCAATCCCTGTGGTGCCGCCGGATTTGCGCCCTATGGTGGCGCTTGATGGCGGACGTTTTGCCACCTCTGATTTGAATGACTTGTATCGTCGCGTAATCAATCGTAATAATCGTTTGAAGCGTTTGCAAGAATTAAACGCTCCGGAAGTTATTTGCCGCAACGAAAAACGCATGTTGCAGGAAGCGGTTGACGCGCTCATAGACAATAGCGCGCGCCACACCAAGACTGTCACTGCCTCTACAGGTCAGAAACGTTCTTTGCGTTCCCTTGCTGATATTTTGAAGGGGAAACAAGGCCGTTTCCGTCAAAATTTGCTCGGTAAGCGTACCGATTATTCCGGTCGTAGTGTGATCGTTGTGGGTCCCGAATTAAAACTTGATGAGTGTGGATTGCCAAAACGTATGGCATTGGAACTTTTTAAGCCATTTGTCATGAGTCAAATTATTTCACGCGGACTGGCGCACAATATCCGTAGCGCGTCACGCTATATTGAAGGGGATCATGAGGAGGTTTGGGATATTTTGGAAGAAATTACTAAGGGAACGCACGTGTTGCTTAACCGCGCTCCCACGCTTCACCGCCTTGGTATTCAAGCATTCCGTCCACGTCTTATAGAAGGCAAGGCAATTCAGGTGCATCCGCTTGTGTGTACCGCTTTTAACGCTGATTTTGATGGAGACCAGATGGCCGTGCACGTGCCGTTGACCGAAGAAGCAAAACGCGAAGCCGCGGAGCTCATGCTTGCGACCAAAAATTTGTTGAAGCCTGCAACAGGGGCGCCTGTGGCCACTCCAAAGCAGGATATTGCATGGGGTGTCTTTTATCTAACCATGGTGCGCGCCGAAAAAGAAAGTTCAAGAATGAAAGTATTTTATTCTCCTGATGAAGCCAAGCTTGTATATAAACTCCGTAAGATTGGATTGCAAGAAGTGATAACCGTGCGTTTTGAGGATCTTAAAAAATTTCCTGACGCTGAATCAAATCTTATCAAAACAACAGTAGGGCGCATTTTATTTAATGAAGCGTTAATTTCAGAATTGGGATTGCCATTTTTTAATGAAGTGGTAACATCAAAACGATTGGGAGATATTGTCCGCCAATGTCTTGAAGTCGGCGGACAAGAACAGACATCAATTATTTTAGACAATATCAAGACTCTTGGTTTTAAGTACATTACAAAATCAGGATTTTCATTGGCAATGGCCGATTTCCCTTTGGTGCCGGCAAAACAAAAACTATTGGGAGAAGGTGATGCTCGTGTGCTTGAAATTGAGGAACAATATGCCGAGGGTTTGCTTACCGATCAAGAACGCCACAATAAGATTATTGAAGTATGGAGTGAAATTAAAGATCAGGTTTCTCGCGCAAGCAAAGGGATGTTGGACAAATTCACTTCCGTTTCAACCATTATTGAGTCCGGCGCGCGTGGTACATGGGGTCAGCTCACGCAGGTTATAGGTATGAAGGGTTTGGTGAGCAATCCAACCGGAGACATTATTGAACTCCCTGTCAAAGGAAGCTTTAAAGAAGGGTTTGATGTGTTGGAGTTTTTTATTTCAACACACGGTACTCGTAAGGGTTTGTCTGATACCGCGTTACGTACCGCAAACGCAGGATACTTGACCCGCCGTTTGGTGGATGTGTCTCAAGATATTGTGGTGCGTGAAGAAGATTGCGGTGATACTGAAGGTATTTTGATTAACTACGAAGATAGCAATGAAATGGGTGAGACGGTATTTGGCCGCGCGTTTGGCCGTACGGTTGTTAAGGATGTAAAAGATCCAAAAGGAAAAAAGATTTTGATAAAAGCAGGTGAATCGGTAGATGAAAAACACATGCGCGTATTGGAAAAAACAGAAATTAAAGAAGTGAGTGTGCGTTCAATTTTGCAATGTCGTCTGCCAAAAGGCGTCTGCCAAAAGTGTTATGGATACGATTTGGCAACCAATCGTTTGGTGGATATTGGCGTAGCGGTTGGAATTATTGCCGCGCAGTCCATTGGTGAACCCGGCACCCAACTTACTATGCGTACATTTCATACTGGTGGTGTGGCGGCCGCAGGCGGAGATATTACGCAAGGTTTGCCGCGTGTAGAAGAACTTTTTGAATCGCGTTCTCCAAAGAAAAAAGCTTATGTGAGTGACGTTTCCGGACAGGTTGAGGTTGTTTCAACAGAACAGCGCGTAATTGAATCGCCGGAAGGCAAGCAGATATTTGAAGGTCGTTTCGGACAAAAAGTAATCCGCATTCAACATACTTCTCCAGGCGAAGCGGTTTTCAGTATCATGAGCGTGGATGAAGTCCTTGTCAAAGAAGGAAGCACGGTAACTGCCGGCGAAGCGCTGATCAAACGGAAATCCGGTGAAAATGTTTTGGCAACCATGGGCGGATCGGTTGTTGTTGAAAAGAAAAAACTTAAAGTAGTGGGCATGGTAGAAGGCGTCAAGGAATATATTATTCCGGCAGGGTACACTATTTGGGTGAAAAATGGCGATTTGGTAAATATTGGCGATCAACTTACGGAAGGGCATCTTGATTTGCATCATTTGTTCGCGCTCAAAGGACGCGAGTCTGTCCAGCGTTACATTTTGCGCGAGATTCAGAACATCTATTCCTCGCAAGGGCAGAAACTCAACGACAAGCACATAGAAATTATCATTCATCAAATGTTCTCACGCGTACTGGTTTCCGATGCGGGCGACACAGATCTTTTGCCGGGTGAAATAGTTGAAAAAGCGCAGTTTATGAACGCAAATCTACATGCGCGTAAAGAAAAGAAAAATCTTGCAATCGCGGAAGAATTATTGCTTGGCGTAACAAAAGTGTCACTTACTACTCAAAGTTTCTTATCCGCCGCGTCGTTTCAAGAGACCGCTAAAGTATTGATTAACGCCGCTATTACCGGCAAGATTGACCGTCTTGAGGGGTTGAAGGAAAACGTTATCATTGGTCGCCTCATACCCGCAGGTACGGGGTTTAGGACTATATAA
PROTEIN sequence
Length: 1297
MFKEPQAVFDAMRLNIASPGRIKEWSYGEVSKPETINYRTQKPEKGGLFAEEIFGPTKDWECYCGKYKKIRYKGIICDKCGVEVTHSLVRRERMGHIDLAVPVAHIWFLRSIPSKIGTVLDMSILALEKVVYFNNFIITHVDENLKVQTHEQLKAEYKSKLKALQNEHKRKLEEISIRAGADASHFMEKAATEHDRKVVALDADFMAAEKELKELTLLNLLTENEYREYSLRYGHLFDAGIGAEAIRELLGKIDLSATIKKLEEDATDAPPARRERMIRRLKLLKSMNQNRIEPEWMVMTAIPVVPPDLRPMVALDGGRFATSDLNDLYRRVINRNNRLKRLQELNAPEVICRNEKRMLQEAVDALIDNSARHTKTVTASTGQKRSLRSLADILKGKQGRFRQNLLGKRTDYSGRSVIVVGPELKLDECGLPKRMALELFKPFVMSQIISRGLAHNIRSASRYIEGDHEEVWDILEEITKGTHVLLNRAPTLHRLGIQAFRPRLIEGKAIQVHPLVCTAFNADFDGDQMAVHVPLTEEAKREAAELMLATKNLLKPATGAPVATPKQDIAWGVFYLTMVRAEKESSRMKVFYSPDEAKLVYKLRKIGLQEVITVRFEDLKKFPDAESNLIKTTVGRILFNEALISELGLPFFNEVVTSKRLGDIVRQCLEVGGQEQTSIILDNIKTLGFKYITKSGFSLAMADFPLVPAKQKLLGEGDARVLEIEEQYAEGLLTDQERHNKIIEVWSEIKDQVSRASKGMLDKFTSVSTIIESGARGTWGQLTQVIGMKGLVSNPTGDIIELPVKGSFKEGFDVLEFFISTHGTRKGLSDTALRTANAGYLTRRLVDVSQDIVVREEDCGDTEGILINYEDSNEMGETVFGRAFGRTVVKDVKDPKGKKILIKAGESVDEKHMRVLEKTEIKEVSVRSILQCRLPKGVCQKCYGYDLATNRLVDIGVAVGIIAAQSIGEPGTQLTMRTFHTGGVAAAGGDITQGLPRVEELFESRSPKKKAYVSDVSGQVEVVSTEQRVIESPEGKQIFEGRFGQKVIRIQHTSPGEAVFSIMSVDEVLVKEGSTVTAGEALIKRKSGENVLATMGGSVVVEKKKLKVVGMVEGVKEYIIPAGYTIWVKNGDLVNIGDQLTEGHLDLHHLFALKGRESVQRYILREIQNIYSSQGQKLNDKHIEIIIHQMFSRVLVSDAGDTDLLPGEIVEKAQFMNANLHARKEKKNLAIAEELLLGVTKVSLTTQSFLSAASFQETAKVLINAAITGKIDRLEGLKENVIIGRLIPAGTGFRTI*