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gwa2_scaffold_8513_17

Organism: GWA2_OD1_53_7_partial

partial RP 34 / 55 MC: 9 BSCG 37 / 51 MC: 12 ASCG 9 / 38 MC: 4
Location: 13058..13645

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor Tax=GWA2_OD1_53_7_partial UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 195.0
  • Bit_score: 391
  • Evalue 5.40e-106
ECF subfamily RNA polymerase sigma-24 subunit KEGG
DB: KEGG
  • Identity: 27.8
  • Coverage: 158.0
  • Bit_score: 75
  • Evalue 2.20e-11
RNA polymerase sigma factor similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 82
  • Evalue 1.00e+00

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Taxonomy

GWA2_OD1_53_7_partial → Giovannonibacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 588
ATGTCTCTACTAGAAGACAGCACCAATTATACTGAGGCACCGGACGAGAAGATCCTTGTTGCTTCTTTAGATCACCCTGATCTTTTTGGTCTTTTGGTTGACCGTTACCAGGATGCTTTTTTGCGCAAGGCAGAGGGGATCGTGCATAGCCGTGAGGAGGCGGAAGACATCGTTCAGGAGACATTTGCGAAGATCTACTTCAATGCTCGGCGATATACACCGCAGGAAGGGGCTACTTTTCGCTCCTGGGCCTACAAAATTCTCGTAAATACAACCTTTACCCACTATCAGAAGTTAAAGAAAAAGGGGAGTCTTCGTGTCGATCTTGACCCGGAGATATGGGATATACTTCCTGACCCTGCGGGCAATTTCTATGAAGAAGAAAGCATGCGGGACTATGTTGCTTCTTTTCTCTCAAAAATGCCCGATGTGCTTGCTCGACCGCTTCGTCTGCACTTCATCGATGAGTACTCACAAAAAGAGATCGCTGAAATGGAGGGGACAACGGTGTCTGCGATCAAGACGCGAATTTACCGAGCGAAACGTGAATTCATTCGATTGGTCAACGGTCAGCAGTCCGCGGGGTAG
PROTEIN sequence
Length: 196
MSLLEDSTNYTEAPDEKILVASLDHPDLFGLLVDRYQDAFLRKAEGIVHSREEAEDIVQETFAKIYFNARRYTPQEGATFRSWAYKILVNTTFTHYQKLKKKGSLRVDLDPEIWDILPDPAGNFYEEESMRDYVASFLSKMPDVLARPLRLHFIDEYSQKEIAEMEGTTVSAIKTRIYRAKREFIRLVNGQQSAG*