ggKbase home page

gwf2_scaffold_2508_28

Organism: GWF2_OD1_35_39

near complete RP 45 / 55 MC: 1 BSCG 48 / 51 MC: 2 ASCG 10 / 38 MC: 1
Location: 25858..26454

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RifOxyA12_full_OD1_Moranbacteria_35_19_curated UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 198.0
  • Bit_score: 393
  • Evalue 2.40e-106
ECF subfamily RNA polymerase sigma-24 subunit KEGG
DB: KEGG
  • Identity: 37.4
  • Coverage: 187.0
  • Bit_score: 123
  • Evalue 9.50e-26
RNA polymerase, sigma-24 subunit, ECF subfamily similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 131
  • Evalue 2.00e+00

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RifOxyA12_full_OD1_Moranbacteria_35_19_curated → Moranbacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 597
ATGAAAAAAAATAAAGTCAAAAAAGAATTGACTGATGGTGAACTGGCGGAAATTGTCCGTAATTTTGATGCGGAAAGATATGGCGAAATAATGGAAAGATACCAAGGGAAACTGTTTGCTTATCTTTACCGTCTGATTGGTTCTCGCGAAGAAACGCAAGATATCTTGCAAGACATTTTTATCAAGGTTTATAAAAATCTAAAAAGCTATGACAAAACGCGGAAATTTTCTTCTTGGATTTATCGCATTGCCCATAACGAAGCGGTAAATCATATTAAAAGAAAATCGCTCAAAAGATTTATCCCGTGGGAAGATATCGCTTCGACGAAAGATAAATTAGAAATGGTGAGCTCGGAGGAGAGCGCTGACAAGGCTTGGCTTCGAAAAGAAATTGGCAGGGAAGTCAATATGGCGATGGAAAAATTGCCTTTGAAATATCGGCAAGTTTTGGCTCTGCGGTATTATGCAGATAAATCATACCAAGAGATTGGTAAAATTTTAGGAAAATCTGTAAACACAGTCGGGACCCTCATCAGTCGAGCCAAAAAGAAACTCGCCCAAGAGTCGCGCTATTTTCGAAAAAGAAGTTTTTATTGA
PROTEIN sequence
Length: 199
MKKNKVKKELTDGELAEIVRNFDAERYGEIMERYQGKLFAYLYRLIGSREETQDILQDIFIKVYKNLKSYDKTRKFSSWIYRIAHNEAVNHIKRKSLKRFIPWEDIASTKDKLEMVSSEESADKAWLRKEIGREVNMAMEKLPLKYRQVLALRYYADKSYQEIGKILGKSVNTVGTLISRAKKKLAQESRYFRKRSFY*