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gwf2_scaffold_3566_7

Organism: GWF2_OD1_35_39

near complete RP 45 / 55 MC: 1 BSCG 48 / 51 MC: 2 ASCG 10 / 38 MC: 1
Location: comp(3685..4269)

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RifOxyA12_full_OD1_Moranbacteria_35_19_curated UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 194.0
  • Bit_score: 385
  • Evalue 5.00e-104
ECF subfamily RNA polymerase sigma factor KEGG
DB: KEGG
  • Identity: 41.2
  • Coverage: 182.0
  • Bit_score: 149
  • Evalue 1.20e-33
RNA polymerase, sigma-24 subunit, ECF subfamily similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 172
  • Evalue 9.00e+00

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Taxonomy

RifOxyA12_full_OD1_Moranbacteria_35_19_curated → Moranbacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 585
ATGCAAGAAAAAGAAGAATTCAAAAATAAAAGCGATGAAGAATTAGCAGGATTGGTTGCCAACAATCCTGATTTTTATTATCTCCTAATGGAACGATATGAAAGTAAAATTTTGCGTTATATCAGACGCATCAGTAATCTACCCAAAGAAACAATCGAAGATTTGGGACAGGAAATTTTTTTGAAAGCGTATGAAAATATAAATGATTTTGATGAAAGTTTGAAATTTTCTTCGTGGCTCTACCGGATTGCCAGAAATCATGTGATAAGTTTTTGGCGAAAAAACAAAAATATGCAAGCAGTGGTTTCTTTCGATGCGGATGAAAATTTCAAAAATATGCTTGAGGCAGAAGGTGATTTGGCAAAAAAAATAGAAGAAAAAAATATGGCAGAAATTATCGGAAAAATTCTCTCGCAAATAAGAATAGATTATCGAGAAGTTTTGATACTTCGATTTATGGAAGATAAGGATTATAATGAAATTAGTGATATTTTGAAAAAACCAGTTGGTACAATTGGCACACTGCTTAACCGGGCAAAAAAAGAATTGAAAAATGAATTGGAAAAAAATAATTTTAAACTTTAG
PROTEIN sequence
Length: 195
MQEKEEFKNKSDEELAGLVANNPDFYYLLMERYESKILRYIRRISNLPKETIEDLGQEIFLKAYENINDFDESLKFSSWLYRIARNHVISFWRKNKNMQAVVSFDADENFKNMLEAEGDLAKKIEEKNMAEIIGKILSQIRIDYREVLILRFMEDKDYNEISDILKKPVGTIGTLLNRAKKELKNELEKNNFKL*