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gwf2_scaffold_4517_21

Organism: GWF2_OD1_35_54

near complete RP 47 / 55 MC: 1 BSCG 45 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: comp(26930..28330)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor {ECO:0000313|EMBL:KKP85133.1}; TaxID=1618722 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Moranbacteria) bacterium GW2011_GWF2_35_54.;" UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 466.0
  • Bit_score: 892
  • Evalue 3.00e-256
RpoD subfamily RNA polymerase sigma-70 subunit KEGG
DB: KEGG
  • Identity: 55.2
  • Coverage: 368.0
  • Bit_score: 382
  • Evalue 2.00e-103
RNA polymerase sigma factor similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 380
  • Evalue 4.00e+00

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Taxonomy

GWF2_OD1_35_54 → Moranbacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1401
ATGGTTACAATCAAAAAAAGGAACAATAAAAAAATAACTGCCAATAAAAAAGGGATTGCCAAAAAATCTCCCAAGAGAAACGTTGCGCCAAAATCGAAAAATAAAAAGGCGATCAAGAAAAATGTTAAAAAGAGTTTTAAAAAGATAGTTAAAAAGAAGAATATTGCAAAAAATATTAAGAAAACTGTGAAAAAAGATAAAAAAATAATTAAGAAAAAATTGAAAAAAATAAATAAAAAGATGGTCAAAGCAACGCCGAAAAAATCAGTCAAAAAATCGGCGGTATTAAATAAAGGCAAGAAGGCGCTTAAGCCCAAAGAAAAAATAAATAATGTCATAGATGATTTAGTTTCTCGTGGAAAGCAACGGGGCTTTATAACAGAAGATGAGATTATTCATACTTTTCCAGATATGGAAAAGAATATTGAAGAATTAGAGGAGCTTTATAGCAAGCTGGAAACGGGCGGAGTGAGAATAATGAGTTCAGGCGAAGTAATTAAAAACGAAACGGACAAAATTGCGGAAGATTTTGTGGTTGAGAAAAATAAAGCCGGTAAAAAGAAAAAGAAAACCGTGGAAGAATCGGAGCCTAATTATAATGATTCAGTTCAGATGTATTTGCGGGAGATTGGCAAGGTTCCTCTTTTGAAATCTGATGACGAGGTTCGGTTGGCGAAATTAATTGAAAAAGGAGAGATTTCCGCCAAGCAAAAATTAACCGAAGCTAACCTTCGTTTAGTGGTGAGTATCGCCAAAAAATACGTGGGCAGATCTAATAATTTGTCTTTATTAGATTTGATTCATAAAGCAGTAGAGAAATTCGATTATCATAAGGGTTATAAATTTTCCACTTATGCAACGTGGTGGATTCGTCAAGCGATTACTCGAGCCCTAGCTGATCAATCCAGAACGATTCGTATCCCCGTGCATATGGTAGAAACTATCAATAAATACACACAGATAGTGAGACAATTAGTCCAAGAATTGGGCCGAGAGCCTTTGGCAGAGGAAATTGCTGCTGAAATGGATATGGAAGTGGACAAGATTAGGCACATTCAAAAAATTTCCCAAGAAACTGTTTCTTTGGAGACTTCTATCGGAGATAGTGATGATGATAGTGTGTTGGGTGATTTTATCGAAGACACAGAAACTATTATGCCCGACCAAACCGCTTCTCGGACACTTCTGAAAAGCCACGTGATTGAAATACTAGAAGAATTAAGTCCACGCGAACAAAGGATTTTAAAAATTCGTTTTGGTTTGGATGATGGCGTAACTCATACTTTGGAAGAAGTGGGGCAAGAGTTTGGCGTAACCCGAGAACGCATCCGACAAATTGAAGCTAAAGCCTTGGACAAAATAAGAAATCAAAAAGGCCTTGGAAAATTAAGAGATTATTAA
PROTEIN sequence
Length: 467
MVTIKKRNNKKITANKKGIAKKSPKRNVAPKSKNKKAIKKNVKKSFKKIVKKKNIAKNIKKTVKKDKKIIKKKLKKINKKMVKATPKKSVKKSAVLNKGKKALKPKEKINNVIDDLVSRGKQRGFITEDEIIHTFPDMEKNIEELEELYSKLETGGVRIMSSGEVIKNETDKIAEDFVVEKNKAGKKKKKTVEESEPNYNDSVQMYLREIGKVPLLKSDDEVRLAKLIEKGEISAKQKLTEANLRLVVSIAKKYVGRSNNLSLLDLIHKAVEKFDYHKGYKFSTYATWWIRQAITRALADQSRTIRIPVHMVETINKYTQIVRQLVQELGREPLAEEIAAEMDMEVDKIRHIQKISQETVSLETSIGDSDDDSVLGDFIEDTETIMPDQTASRTLLKSHVIEILEELSPREQRILKIRFGLDDGVTHTLEEVGQEFGVTRERIRQIEAKALDKIRNQKGLGKLRDY*