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gwf2_scaffold_6844_14

Organism: GWF2_WWE3_42_42

near complete RP 41 / 55 MC: 1 BSCG 45 / 51 MC: 1 ASCG 9 / 38 MC: 1
Location: 12246..12950

Top 3 Functional Annotations

Value Algorithm Source
ribosomal large subunit pseudouridine synthase D; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] Tax=RIFOXYD1_FULL_WWE3_43_17_curated UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 222.0
  • Bit_score: 439
  • Evalue 2.70e-120
ribosomal large subunit pseudouridine synthase D KEGG
DB: KEGG
  • Identity: 87.4
  • Coverage: 222.0
  • Bit_score: 389
  • Evalue 6.40e-106
Pseudouridine synthase similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 146
  • Evalue 8.00e+00

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Taxonomy

RIFOXYD1_FULL_WWE3_43_17_curated → WWE3 → Bacteria

Sequences

DNA sequence
Length: 705
GTGGAAGATCAAAAAATAAACATAATCCATGAAACCGGCGATTACCTGGTAATAGACAAACCGGCCGGATTGGTAGTTAACCGCTCAAACACGGCAAAAGACATTACCTTACAGGACATGATAGAGGAGAGAAGTCCCGTTGCCTCTGATGCTGACCCGGACGAGGTAAGTCCCAGCGATTTTGTTTCGCGTTCGGGAATTGCACACCGTTTAGACAAAGACACCTCAGGAATACTTCTCGTAGCAAAAAACGAAGAATTTTTCGAGAATGTGCTGAGCCAATTCAAAGAACGTAGGATAGAGAAGGAGTATGCTGCGGTCGTGCACGGTAAACTCGAAGAGGATTCTATGGAAATCGATGCGCCGATAAAAAGAAGTCCCAAAGATCCGATGAAAATGGCTATAGTGGCGGACGGGAAAGAAGCCCACACTTTCGTGAAGAGAGTAAGTGAGCGTGAAATCGCAGGAAGTACTTTTTCTTATCTTGAAATAAAACCTACGACAGGACGCACTCACCAGATTCGAGTACATTTGGCAGCTGCTTTATTGTACATTGCCGGCGACCCTATTTATTGTCCAAAAAATTTACTCACAATAAGCACAGAAGTCTTCGGGAGAATGATGTTGCATGCGACCAAAATAAGATTCTTTGACCCGCAATTACATNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTCACTCTAA
PROTEIN sequence
Length: 235
VEDQKINIIHETGDYLVIDKPAGLVVNRSNTAKDITLQDMIEERSPVASDADPDEVSPSDFVSRSGIAHRLDKDTSGILLVAKNEEFFENVLSQFKERRIEKEYAAVVHGKLEEDSMEIDAPIKRSPKDPMKMAIVADGKEAHTFVKRVSEREIAGSTFSYLEIKPTTGRTHQIRVHLAAALLYIAGDPIYCPKNLLTISTEVFGRMMLHATKIRFFDPQLHXXXXXXXXXXSL*