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gwf2_scaffold_3279_16

Organism: GWF2_OD1_42_7_plus

megabin RP 41 / 55 MC: 9 BSCG 41 / 51 MC: 11 ASCG 9 / 38 MC: 2
Location: comp(16539..17747)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma 38 subunit, RpoS; K03086 RNA polymerase primary sigma factor Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 402.0
  • Bit_score: 788
  • Evalue 4.10e-225
RNA polymerase, sigma 38 subunit, RpoS KEGG
DB: KEGG
  • Identity: 54.4
  • Coverage: 364.0
  • Bit_score: 367
  • Evalue 5.90e-99
RNA polymerase sigma factor similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 366
  • Evalue 7.00e+00

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Taxonomy

RLO_OD1_Nomurabacteria_40_42 → Nomurabacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1209
ATGAAAACAACAAAAAAGACAAAAAAAGTTAGTACAAAAATTAGAAAACACAAGATGGCAAAAAAACCAAAGAGTAAAAAACTTAAAATAAAAAAATTAAAAATTTCCAAAAAATTTCCTCTCAAACTGGCATTTTTGGAAAAAAAGGCGGAAAATTTAACTCGTATCTCAAGCGAGCTCATCGAAAAGGGGCGCAAGAGGGGATTTATCACTTACGATGAAATCTTAAAAACTTTCCCGGATATTGAAAACAACATTTTATTCTTAGACGAGCTTTACGAAAAGTTTGCCATTGCCGGGATTGATGTCTTGGAAGGCGGAAACTTGCTCAATTTGAATGTCGACTTGACCGACAAAGATTTGAACAAATCCACGATGCATGATTCAATTCAGATGTATTTGAAAGAGATCGGTCAGTATCCGCTTATCCATGCGGGCGAAGAAAAGGAACTCGCCAGACGCATCGAACACGGTGATCTGGAAGCCAAAAATCTGCTCGCCCGCGCGAACTTGCGTTTAGTGGTTTCTATCGCCAAAAAATACGTAGGACGCTCTGCCAATTTAACTCTGCTTGACTTGATTCAGGAAGGCAATTTGGGATTGTTCAAGGCAGTGGAAAAATTCGATTGGACCAAGGGATATAAATTTTCCACTTATGCGACATGGTGGATTCGCCAGTCTATTACCCGCGCCTTGGCCGACCAATCTCGCACTATCCGCATACCGGTGCACATGGTAGAGACAATTTCGAAATATAAACAGACGCATCGCAGGCTTTCCCAAGATTTAGGTCGAGAGCCGTTGGCCGAAGAGATTGCCACCGAGATGGGCATCCCGGTGGAAAAAATTCACATCATCGAAAATATTTCGCAAGAGACAGTATCACTTGAACAGCCGGTCGGTGATGATGACGACAAATCAACCTTAGAAAATTTTATTCCGGATGATAAAATTTTACGTCCGGATCAAGAATCTTCTCGCCGGATTCTCTCAGATCAGATTCGGGAAGTTTTATGCGAACTCAATCCCAAAGAACGCAAGATTCTCGAAATGCGCTATGGTCTCCTAGACGGCATCCAACACACGCTCGAGCGGGTAGGGGAAGAATTCGGCGTGACCCGCGAGCGTATCCGCCAAATCGAAGTCAAAGTCCACGAAAAACTCCGCCAACACGACAAGATTTCGAGGTTGAAGAATTATTTTGACTAA
PROTEIN sequence
Length: 403
MKTTKKTKKVSTKIRKHKMAKKPKSKKLKIKKLKISKKFPLKLAFLEKKAENLTRISSELIEKGRKRGFITYDEILKTFPDIENNILFLDELYEKFAIAGIDVLEGGNLLNLNVDLTDKDLNKSTMHDSIQMYLKEIGQYPLIHAGEEKELARRIEHGDLEAKNLLARANLRLVVSIAKKYVGRSANLTLLDLIQEGNLGLFKAVEKFDWTKGYKFSTYATWWIRQSITRALADQSRTIRIPVHMVETISKYKQTHRRLSQDLGREPLAEEIATEMGIPVEKIHIIENISQETVSLEQPVGDDDDKSTLENFIPDDKILRPDQESSRRILSDQIREVLCELNPKERKILEMRYGLLDGIQHTLERVGEEFGVTRERIRQIEVKVHEKLRQHDKISRLKNYFD*