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gwe1_scaffold_2378_8

Organism: GWE1_OP11_38_92

near complete RP 42 / 55 BSCG 41 / 51 MC: 3 ASCG 9 / 38 MC: 1
Location: comp(4938..5516)

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma factor KEGG
DB: KEGG
  • Identity: 39.7
  • Coverage: 189.0
  • Bit_score: 136
  • Evalue 6.20e-30
RNA polymerase, sigma-24 subunit, ECF subfamily similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 150
  • Evalue 3.00e+00

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Taxonomy

RIFOXYA1_FULL_OP11_Shapirobacteria_39_17_curated → Shapirobacteria → Microgenomates → Bacteria

Sequences

DNA sequence
Length: 579
ATGTTTGATCCAAAACTTTGTCAATCTCTAGACGATCATCAATTGGTCCGTCTTTCTCTTGACGACAGTAATTATTATTATTGCCTTATGTCACGTTACGAAAAACAACTGGCCGCCTATGTCCACCATCTGACTTTTTTATCTCAATCAGATATCGACGATATTATTCAAAATTCTTTTGTCAAGGCTTATCAAAACCTAAATGATTTTGATTTTGACTTTAAATTTTCTTCCTGGATATATCGTATCGTCCACAATCAATCCGTCAACTTCCTCAAAAAATCAAAAAAGACCCAGACCTTAAACATCGATGATGATTATAGTGAAATTACCAATTGGTTAGTTAGTGACACCGACATCGAAAAACAAACTCAGGATTCCCAATTTCAGGACTACATCCGGTTGATCTTAGCTCAACTTAAACCGGAATATCAACAGGTTCTTGTCTTAAAATTCTTACAGGACAAAGATTATAAAGAAATTAGTCACATTTTACAAAAGCCCATGGGTACCGTCGCTACCCTTATTAATCGGGCCAAAAAACAATTTAAAACAATCTATGACCAAAACCAGTATTAG
PROTEIN sequence
Length: 193
MFDPKLCQSLDDHQLVRLSLDDSNYYYCLMSRYEKQLAAYVHHLTFLSQSDIDDIIQNSFVKAYQNLNDFDFDFKFSSWIYRIVHNQSVNFLKKSKKTQTLNIDDDYSEITNWLVSDTDIEKQTQDSQFQDYIRLILAQLKPEYQQVLVLKFLQDKDYKEISHILQKPMGTVATLINRAKKQFKTIYDQNQY*