ggKbase home page

gwd2_scaffold_5525_7

Organism: GWD2_OD1_46_48

partial RP 33 / 55 BSCG 34 / 51 MC: 2 ASCG 8 / 38 MC: 2
Location: comp(5260..5718)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:KKU22253.1}; TaxID=1618619 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Azambacteria) bacterium GW2011_GWC1_46_13.;" UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 152.0
  • Bit_score: 308
  • Evalue 6.10e-81
RNA polymerase subunit sigma-24 KEGG
DB: KEGG
  • Identity: 37.9
  • Coverage: 153.0
  • Bit_score: 103
  • Evalue 6.00e-20
RNA polymerase sigma-W factor similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 109
  • Evalue 6.00e+00

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWC1_OD1-like_46_13 → Azambacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 459
GGCAACGCGCGGGACGCGGAAGACGCGACGCAAGAAACGTTTTTGCGGGTATGGCACAATCTTAAAAAGTTTGATCGGCAAAAAAAATTCAAAACCTGGATTTTCACCATCGCCCGAAACGTTTCAATTGATCTTCTTAGGAAGAAACATGGGACAGTGCCGTTTTCAAAGTTTGAGAACGATGAGAGAGACAATCCTTTTTTGGAAACGCTCGCGGATGTTTCGCCGCTTCCCGACGAGCTTTCGGAGCGAAACGGCTTGGTGGCGGCGCTTGCAATGGCCGTGGAAGCGTTATCTCCAAAATACCGTAAAGTGGTTTTGCTTCGCCACGGCGATAATTTCACTTTTCGCGAAATCGGCGAATCGCTCGGCGAACCGCTTCATACCATAAAAAGCCGCTACCGCCGAGCCGTCATTATGCTTAAAAAAGCGCTCTCAAATTCTTGGGGGTCTTATTAA
PROTEIN sequence
Length: 153
GNARDAEDATQETFLRVWHNLKKFDRQKKFKTWIFTIARNVSIDLLRKKHGTVPFSKFENDERDNPFLETLADVSPLPDELSERNGLVAALAMAVEALSPKYRKVVLLRHGDNFTFREIGESLGEPLHTIKSRYRRAVIMLKKALSNSWGSY*