ggKbase home page

gwf1_scaffold_14_60

Organism: GWF1_Spirochaetes_31_7

near complete RP 52 / 55 BSCG 51 / 51 ASCG 14 / 38
Location: comp(73747..74736)

Top 3 Functional Annotations

Value Algorithm Source
RpoD subfamily RNA polymerase sigma-70 subunit; K03086 RNA polymerase primary sigma factor Tax=GWE2_Spirochaetes_31_10_curated UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 329.0
  • Bit_score: 638
  • Evalue 5.60e-180
RpoD subfamily RNA polymerase sigma-70 subunit KEGG
DB: KEGG
  • Identity: 49.2
  • Coverage: 333.0
  • Bit_score: 310
  • Evalue 5.30e-82
RNA polymerase sigma factor similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 310
  • Evalue 6.00e+00

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWE2_Spirochaetes_31_10_curated → Spirochaetes → Bacteria

Sequences

DNA sequence
Length: 990
ATGATTAAAGAAAAGACCATATCAGCAAAAGTAACAACAACGAAAATTAATAAAGTAGCAAAGTCAATTGATGCGTCCATATCAAACATGGAAGATTCGTCTTCACTCGCAATTTATCTCAAAGAAATTGCAAAGATTCCATTGTTAAGTTCAAAAGAAGAGTACGATGTTTCCAAGTTAATTGTCGATCACCAGGAGTCTATTGATAAATTAACCAAAAATCCTGATTCTGATAACGATGTAATTAAAAAAGAGTTAAAACACCACACCGATTTGATGATGTTTAATAAAAATAAAATGATTAGAGCTAATTTAAGGCTTGTAATATCAATAGCTAAAAAATACCAGAATAGAGGCTTAGGTTTTCTTGATCTAATCGATGAAGGTAACATAGGTCTTATTGAGGCGATAGAAAGATTTGATTATACAAAAGGCTTTAAATTTTCAACATACGGTACATGGTGGATTAGACAAGCAATTGTTAAAGCATTAGCCGATAAAGGGAAAACAATTAGAATTCCTATACATATGCTTAATACTATTAAAAAGTGTTATTTTGCTGCAAAAAGCATAAATGAGTCAACCGGTCGTGAAGCTTCGTATCAGGAAGTATCTGAAATCGTAGGAATTTCAGCCGATAAAATAAAGAAAATGGGAAGTATTCCTCAAGATACCTATTCATTGGATGCACCAATTGAAGGTGATTCAAGTAAAGAGTTTGGTGAATTTGTCGGTGAGTCACCGTATGAAGAAATTTTTTCTGCTGCTTTAACAGATACTATTGATGCTGTTTTAGATAATCTTAGCATTAGAGAAAAACAAATTATTGAATTGAGGTTCGGTCTTAATAGTGTTGGTTCTCATACTTTAGAAGAAACCGGACAACTTCTTGGAATTACCAGAGAAAGAGTCAGACAAATTCAGAAAAAAGCATTGAGAAAATTAAAAGACAGTTCTTTTGCAAAACAATTAGAATGTTTTAAGAAATAA
PROTEIN sequence
Length: 330
MIKEKTISAKVTTTKINKVAKSIDASISNMEDSSSLAIYLKEIAKIPLLSSKEEYDVSKLIVDHQESIDKLTKNPDSDNDVIKKELKHHTDLMMFNKNKMIRANLRLVISIAKKYQNRGLGFLDLIDEGNIGLIEAIERFDYTKGFKFSTYGTWWIRQAIVKALADKGKTIRIPIHMLNTIKKCYFAAKSINESTGREASYQEVSEIVGISADKIKKMGSIPQDTYSLDAPIEGDSSKEFGEFVGESPYEEIFSAALTDTIDAVLDNLSIREKQIIELRFGLNSVGSHTLEETGQLLGITRERVRQIQKKALRKLKDSSFAKQLECFKK*