ggKbase home page

gwf1_scaffold_155_15

Organism: GWF1_OD1_39_37

near complete RP 43 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(17774..19069)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor {ECO:0000313|EMBL:KKS35746.1}; TaxID=1618952 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWE2_42_14.;" UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 431.0
  • Bit_score: 834
  • Evalue 5.30e-239
sigA; RNA polymerase sigma factor RpoD KEGG
DB: KEGG
  • Identity: 51.8
  • Coverage: 369.0
  • Bit_score: 354
  • Evalue 4.20e-95
RNA polymerase sigma factor similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 347
  • Evalue 6.00e+00

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Parcubacteria bacterium GW2011_GWE2_42_14 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1296
ATGAAAAATAAAAAAATAAAGATAAAAAAAGGTAAAGAGACAAGGCGTAAGCCACGAAAGTCTGCCAAGAAATTGGTAAAAGCCAAAATAAAGGCAAAGAAGACAAAGAGGTTCGTTGTACCAAAGGTAAGAAAGAAAAAGAAAAACAAAACCTCGCTTGCAATGCGTGCTGCGAAAACCGTTGTCCAAAAGAAGGCTCCAGCCATGAAGAAATCTGATAGGCAGGGTGAGGGGATGGTGAGGCTCCTGGCTAAGGGCAAGGAACGTGGCTATGTTACTTATGATGAAATATTAAAAGAGTTTCCCACGGTAGAAGACGACATAATTTTTCTTGATGAATTATACGAAAAGTTGTCTGAAAGTGGCGTGGACATTCTAGAAGGAGGAGGATTGCTTGAGAGCTCATCAAATGAAGACCTTATAAATAAAAAATATGCTTATGGGCGAAACAGTGAGTCTTCCTACGATTCTATCCAGATGTATCTCAAAGAGATTGGTCAATACCAGCTGATTTCTGGAGGGATGGAAAAAGAGCTGGCAAAGCGAATAGAAAAGGGGGACGTTGAGGCCATAAACCTTTTGGCCAGGGCCAACCTTCGTCTTGTGGTTTCTATTGCCAAGAAATATGCAAATCGAAGTCCTGATTTAACTCTGCTTGATTTGATTCAAGAAGGAAACTTAGGATTATTTAAGGCTGTAAGTAAGTTTGACTGGACAAAGGGTTATAAGTTTTCAACCTATGCCACATGGTGGATTCGTCAGGCCATAACCCGTGCCCTGGCAGACCAGTCCAGAACTATTCGTGTACCAGTTCACATGGTGGAGACTATTGCCAAGTATAAACAGGTCGTCAGAAGACTATCGCAAGACTTGGGGAGAGACCCACTACCAGAGGAGATTGCTATTGAAATGAATCTTTCTGTTGATAAGGTATATACAATAGAGAAAATAGACCAAAGCACCCTCTCTCTAGAGAGTCCAATCGGGGAGGATGGGGATGAGAGCAAGAGTAAGCTTGGAGATTTCCTTGCGGACGAGAAGATTCTTTCACCAGAAATGGAGTCATCAAGAAGAATAATATCAGACCAGGTGAAGGAAATATTGAATGACTTACCAGAAAAGGAAAGAAAAATCTTAGAGCTTCGTCATGGACTTGTTGATGGTGTAACACACACGCTTGAAGAAGTGGGCAGGGAGTTTGGTGTGACCCGAGAACGTATAAGACAAATTGAGGCCAAGGCCCATGAAAAGATTAGACAGCATGATAAAATAAATCGCTTACGTAATTATTTCTAG
PROTEIN sequence
Length: 432
MKNKKIKIKKGKETRRKPRKSAKKLVKAKIKAKKTKRFVVPKVRKKKKNKTSLAMRAAKTVVQKKAPAMKKSDRQGEGMVRLLAKGKERGYVTYDEILKEFPTVEDDIIFLDELYEKLSESGVDILEGGGLLESSSNEDLINKKYAYGRNSESSYDSIQMYLKEIGQYQLISGGMEKELAKRIEKGDVEAINLLARANLRLVVSIAKKYANRSPDLTLLDLIQEGNLGLFKAVSKFDWTKGYKFSTYATWWIRQAITRALADQSRTIRVPVHMVETIAKYKQVVRRLSQDLGRDPLPEEIAIEMNLSVDKVYTIEKIDQSTLSLESPIGEDGDESKSKLGDFLADEKILSPEMESSRRIISDQVKEILNDLPEKERKILELRHGLVDGVTHTLEEVGREFGVTRERIRQIEAKAHEKIRQHDKINRLRNYF*