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gwc1_scaffold_447_11

Organism: GWC1_OP11_47_20

near complete RP 40 / 55 MC: 2 BSCG 45 / 51 MC: 3 ASCG 11 / 38
Location: 6425..7054

Top 3 Functional Annotations

Value Algorithm Source
ribosomal large subunit pseudouridine synthase D; K06180 ribosomal large subunit pseudouridine synthase D [EC:5.4.99.12] alias=ACD52_120371.6558.8G0005,ACD52_120371.6558.8_5,ACD52_C00091G00005 id=75401 tax=ACD52 species=unknown genus=Dehalococcoides taxon_order=unknown taxon_class=Dehalococcoidetes phylum=Chloroflexi organism_group=OP11 organism_desc=OP11 similarity UNIREF
DB: UNIREF90
  • Identity: 43.6
  • Coverage: null
  • Bit_score: 188
  • Evalue 2.20e-45
Pseudouridine synthase {ECO:0000313|EMBL:KKU73398.1}; TaxID=1618361 species="Bacteria; Microgenomates.;" source="Microgenomates (Amesbacteria) bacterium GW2011_GWB1_47_26.;" UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 209.0
  • Bit_score: 430
  • Evalue 1.10e-117
23S rRNA pseudouridine synthase D KEGG
DB: KEGG
  • Identity: 41.7
  • Coverage: 216.0
  • Bit_score: 165
  • Evalue 1.80e-38

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Taxonomy

GWB1_OP11_47_26 → Amesbacteria → Microgenomates → Bacteria

Sequences

DNA sequence
Length: 630
ATGCGGGTGATCGACAAACCGGCAGGATGGGTGGTTAACAAAGCACAGACTGTTAAAGAAAAAACAATTCAAGATTGGTTTGGGATAGGCTCTGGGCAAGGAGAGTTTTATGATAAGGGGGGAATTGTGCACAGGTTAGACAAGGATACCAGCGGGGTGATGGTACTGGCAAAAACGCTGCAGGCTTATGAGAAACTGAAACAGCAGTTTTTGGAACGCAAAACGGTGAAAAAATACGTGGCGCTGGTGCATGGGGAATTTAAAGAGAACGAGGGAATAATAAATACTCCGATAGAAAGAATTGGCCAGAAATTTTATGTAGGAAAAGATTTGTCGAGAACTGCCATCACCGAATGGCAAGTAATTAAAAAAATCGGAGAAAACACACTGGTTGAACTCACACCTCACACCGGACGGACGCATCAGTTAAGAGTACATATGCGGCATCTGGGTCACCCGATTGTAGCCGACCCGATTTATGGAGACCGGAAAACCTGGATGAAAGATTTGCAAATTTGCCCGCGGCTCTTTCTGCATGCCAAATTTTTAGAAATAACCCATCCGGCGACTGGAGAAAAAATGACATTTACAGCGGAGCTTCCGGAAGAGTTGGAAAAGGTGCTACACTAA
PROTEIN sequence
Length: 210
MRVIDKPAGWVVNKAQTVKEKTIQDWFGIGSGQGEFYDKGGIVHRLDKDTSGVMVLAKTLQAYEKLKQQFLERKTVKKYVALVHGEFKENEGIINTPIERIGQKFYVGKDLSRTAITEWQVIKKIGENTLVELTPHTGRTHQLRVHMRHLGHPIVADPIYGDRKTWMKDLQICPRLFLHAKFLEITHPATGEKMTFTAELPEELEKVLH*