ggKbase home page

gwd2_scaffold_934_20

Organism: GWD2_OD1_36_198

near complete RP 38 / 55 MC: 2 BSCG 42 / 51 MC: 3 ASCG 8 / 38
Location: comp(14334..15878)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD, RNA polymerase primary sigma factor {ECO:0000313|EMBL:KKP90019.1}; TaxID=1618894 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_36_10 UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 514.0
  • Bit_score: 980
  • Evalue 9.30e-283
RNA polymerase, sigma 38 subunit, RpoS KEGG
DB: KEGG
  • Identity: 58.1
  • Coverage: 370.0
  • Bit_score: 408
  • Evalue 3.80e-111
RNA polymerase sigma factor similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 407
  • Evalue 4.00e+00

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWC1_OD1_36_108 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1545
ATGCACTCAGCTGAATATTTATTTGAGATGAAAACAATGAAAAAAAAGTCTAAAAAAGTTGTAGTAAAAAAAGTTATTAAAGTAGTTAAAAAAGCAGCATCAAAAAATGTTAAGAAGGTAGTTGCGTTAAAAAAAACAAAAGTCGTTGTTAAGCCCAAACCTAAAAAAGTTGTAAAATTTATTAAAGCAAAAAAAATCGTGCAGAAAAAAAATAAGAAAATCGTGCAGAAAAAAAATGCTGCAAAAAAGATCGTTGTAGCAAAAAAAACGGTAGTTAAAAAAGCAGCTGTAAAAAAAATACAGCCTGTTAAAAAAGTTGCGCCCAAAAAGTCTGTAACACCAAGCAAGCAAGTAGCGCAAAAAATAGTAGTAAAACCTAAGAAAATTGTTGAAAAAGCTCCTCAGCCAAAGAAAAAAACAGCAGTAGTTGCCAAAGAGGAAGGTGAAAACAAGGTTGATATTATTGCAGAACTTATTGCGCGTGGAAAACAACGTGGTTTTGTGACTGAAGATGAAATCATTCATCTTATTCCGGAAGTTGAAGAAGAGCTTGATGAACTTGAAAATCTGTATGAACAATTGGAAACTGCGGGAGTGAAAATTGTTGTTTCTGATGATATGCTCAAGATTGATTCAGACAAAGAAGCTGAGATATATGAAAAAAGTAAAAAAGATAAAAATGCGGATTCAAATTTGTTGGATGGAATAGAAGACAGCTCTTCTGATTTGGTGCAAATGTATCTTCGTGAAATTGGACGTGTGCCACTCCTTAAATCTGAAGAAGAAATTAAGCTTGCCAAAGCTAATGAAAAAGGGGACTTGGCATCAAAACAAAAGTTGACCGAAGCAAATCTTCGTTTGGTGGTTAGTATTGCAAAAAAATATGTTGGACGTTCGCACAATCTTTCGTTGTTGGATTTGATTCAAGAAGGTAACATCGGACTCTTTCGCGCTGTGGAAAAATTTGATTATCGAAAAGGTTTCAAATTTTCAACCTATGCAACTTGGTGGATTCGCCAAGCAATTACCAGAGCTTTGGCTGATCAGTCGCGCACAATTCGTATCCCAGTCCATATGGTGGAAACTATTAACAAGTATACTCAGATTACTCGAAGATTGGTGCAAGAATTGGGACGCGAACCTTTGCCAGAAGAAATTGCAGCTGAAATGAATTTGGAAGTAGATAAGATTCGTCACATTCAAAAAATTTCCCAAGAAACAGTTTCGCTTGAAACTTCAGTTGGGGACTCTGATGATGACAGTGTGCTTGGAGATTTCATTGAAGACACTGAAACAGTGATGCCACATCAAGTTGCTTCACGAAAACTACTCAAAAATCACGTCGGCGAAGTTTTGCACGACCTTACTCCGCGCGAACAAAAGATTCTTAAAATTCGTTTTGGTTTGGAAGATGGTGTGACTCACACTTTGGAAGAAGTTGGAAAGGAATTTGGAGTAACCCGCGAACGTATTCGTCAGATTGAAGCTAAGGCTCTCGACAAGATTCGTCAACACGGCTCTATTAGTAAACTTAAGGATTACTAG
PROTEIN sequence
Length: 515
MHSAEYLFEMKTMKKKSKKVVVKKVIKVVKKAASKNVKKVVALKKTKVVVKPKPKKVVKFIKAKKIVQKKNKKIVQKKNAAKKIVVAKKTVVKKAAVKKIQPVKKVAPKKSVTPSKQVAQKIVVKPKKIVEKAPQPKKKTAVVAKEEGENKVDIIAELIARGKQRGFVTEDEIIHLIPEVEEELDELENLYEQLETAGVKIVVSDDMLKIDSDKEAEIYEKSKKDKNADSNLLDGIEDSSSDLVQMYLREIGRVPLLKSEEEIKLAKANEKGDLASKQKLTEANLRLVVSIAKKYVGRSHNLSLLDLIQEGNIGLFRAVEKFDYRKGFKFSTYATWWIRQAITRALADQSRTIRIPVHMVETINKYTQITRRLVQELGREPLPEEIAAEMNLEVDKIRHIQKISQETVSLETSVGDSDDDSVLGDFIEDTETVMPHQVASRKLLKNHVGEVLHDLTPREQKILKIRFGLEDGVTHTLEEVGKEFGVTRERIRQIEAKALDKIRQHGSISKLKDY*