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gwc1_scaffold_375_46

Organism: GWC1_OD1_42_21

near complete RP 42 / 55 MC: 2 BSCG 45 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: 52481..53719

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor {ECO:0000313|EMBL:KKT00577.1}; TaxID=1618731 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA1_43_17.;" UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 412.0
  • Bit_score: 809
  • Evalue 1.70e-231
RpoD subfamily RNA polymerase sigma-70 factor KEGG
DB: KEGG
  • Identity: 49.9
  • Coverage: 417.0
  • Bit_score: 368
  • Evalue 3.50e-99
ccl:Clocl_2118 RNA polymerase, sigma 38 subunit, RpoS; K03086 RNA polymerase primary sigma factor alias=RAAC4_OD1_62,RAAC4_OD1_C00001G00062 id=5227550 tax=RAAC4_OD1 species=unknown genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes similarity UNIREF
DB: UNIREF90
  • Identity: 80.7
  • Coverage: null
  • Bit_score: 535
  • Evalue 1.90e-149

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Taxonomy

GWA1_OD1_43_17 → Nomurabacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1239
ATGAAGAAAAAACACAAAAAGAAAAAATTAAATAAGAGCAAAAAATTTACAAAGAAGAAAAAAAGTAGAAAAGTTAAAAAAACCAGGCCCCGACGCCTAAAGAGGTCGGAATCCCGATCAAAAGCGTCGGGAAAAAATACTGCGAAAATAAAAAAGTTATCTTATGCCGAAAAGAAAGCCGAAAATCTGGCGCATATCTCAAACGGACTTATAGAAAAAGGGCGCAAAAGGGGATTTATCACTTACGATGAAATATTAAAAACTTTTCCGGACATAGAAAACAATATTTTATTTTTGGACGAGCTTTATGAAAAGTTCGCAATCGCCGGTATTGATGTGCTGGAAGGTGGAAATCTGCTCAATCTGGATTTAGACCTAAACGACAAGGACTTGAACAAGGGAAGCATGCACGATTCCATTCAAATGTATTTGAAAGAAATCGGACAATACCCGCTGATTCATGCCGGCGACGAGAAGGACCTGGCCAAGCGGATTGAGCGCGGAGATTTGGAGGCGAAAAATCTATTGGCTCGCGCCAATTTGCGTCTGGTGGTTTCTATCGCCAAGAAATACGTCGGTCGCAGCGCCAATTTGACTCTACTTGACCTGATTCAGGAAGGAAACCTGGGTTTGTTCAAAGCGGTGGAAAAATTTGACTGGACTAAGGGTTATAAATTTTCAACCTATGCCACTTGGTGGATCCGTCAGTCCATTACTCGGGCACTCGCCGACCAATCCCGCACTATCCGCATTCCCGTCCATATGGTGGAAACAATATCAAAATACAAACAGACGCACAGACGACTTTTCCAGGACCTGGGTCGGGAGCCCTTGGCTGAGGAAATTGCCACCGAGATGGGGATACCGGTGGAAAAAATCCATGTAATTGAAAATATTTCACAAGAGACAGTGTCTCTGGAACAGCCGGTCGGGGATGACGACGATAAATCCACATTGGAGAATTTTATTCCCGACGATAAGATTTTACGTCCCGACCAGGAGTCCTCCCGCCGGATTCTCTCCGACCAGATTCGCGAAGTTCTGAACGAGCTCAACCCCAAGGAGCGTAAAATTCTGGAAATGCGCTACGGGCTCCTGGACGGCATTCAGCACACCCTGGAGAGAGTTGGGGAAGAGTTTGGCGTAACCCGCGAGCGTATCCGCCAGATTGAAGCCAAGGTGCACGAAAAACTCCGCCAGCACGAAAAAATTTCCCGGCTGAAGAACTACTTTGATTAG
PROTEIN sequence
Length: 413
MKKKHKKKKLNKSKKFTKKKKSRKVKKTRPRRLKRSESRSKASGKNTAKIKKLSYAEKKAENLAHISNGLIEKGRKRGFITYDEILKTFPDIENNILFLDELYEKFAIAGIDVLEGGNLLNLDLDLNDKDLNKGSMHDSIQMYLKEIGQYPLIHAGDEKDLAKRIERGDLEAKNLLARANLRLVVSIAKKYVGRSANLTLLDLIQEGNLGLFKAVEKFDWTKGYKFSTYATWWIRQSITRALADQSRTIRIPVHMVETISKYKQTHRRLFQDLGREPLAEEIATEMGIPVEKIHVIENISQETVSLEQPVGDDDDKSTLENFIPDDKILRPDQESSRRILSDQIREVLNELNPKERKILEMRYGLLDGIQHTLERVGEEFGVTRERIRQIEAKVHEKLRQHEKISRLKNYFD*