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gwc1_scaffold_1325_4

Organism: GWC1_OD1_45_14

near complete RP 43 / 55 MC: 2 BSCG 44 / 51 ASCG 11 / 38
Location: 1939..2523

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:KKT94588.1}; TaxID=1618915 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_45_14.;" UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 194.0
  • Bit_score: 383
  • Evalue 1.90e-103
ECF subfamily RNA polymerase sigma factor KEGG
DB: KEGG
  • Identity: 45.7
  • Coverage: 184.0
  • Bit_score: 163
  • Evalue 6.20e-38
RNA polymerase, sigma-24 subunit, ECF subfamily similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 163
  • Evalue 4.00e+00

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Taxonomy

GWC1_OD1_45_14 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 585
ATGTTGAATTTGGAAGAATTGGAGAAGAAAACCGATCAGGAGTTGGTAGAATTAGCCAAGGATGACCAAGAAATGTTCGGGGCATTGATGGCTAGATATCAAAGGCCCTTGTTTGCTTATGTCAAAAGGATCTCCCAGCTTGGCAATGAGGACGTCGAAGATCTCTTGCAGGATATTTTCGTTAAGGCATATCTTAATCTCAATTCCTATGAAAGCTCGTTGAAATTTTCCAGTTGGATATACCGCATCTCGCACAATCATGTAGTGGATAATTTTCGCAGGATTTCAGCCCGACCGAAAATCCTTAACACTGAGGACGACAGTTGGATGAGGATAGTGAGGGCGGATACTGATTTGGAAAAGGAGTTGGCTGACAGGGATTGCGCTGGAAAAATAAAAGAGGCGATTGAACAGATGCCGCTCAAATACAGGGAGGTATTGGTACTCCGCTTCGTTGAGGACAAGGAATATGAGGAAATTATGGATATTCTCCAAAAACCGAAAGGGACCGTGGCGACGCTGATCGCCAGAGGCAAAAAATTGATCGAGAAGGATATAAAGAAGAAGGGTATAAGATTTTTTTAA
PROTEIN sequence
Length: 195
MLNLEELEKKTDQELVELAKDDQEMFGALMARYQRPLFAYVKRISQLGNEDVEDLLQDIFVKAYLNLNSYESSLKFSSWIYRISHNHVVDNFRRISARPKILNTEDDSWMRIVRADTDLEKELADRDCAGKIKEAIEQMPLKYREVLVLRFVEDKEYEEIMDILQKPKGTVATLIARGKKLIEKDIKKKGIRFF*