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gwc1_scaffold_10567_4

Organism: GWC1_OD1_50_9

near complete RP 35 / 55 MC: 5 BSCG 43 / 51 MC: 7 ASCG 11 / 38 MC: 4
Location: 4366..4965

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor {ECO:0000313|EMBL:KKU16670.1}; TaxID=1618653 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_45_9b.;" UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 199.0
  • Bit_score: 391
  • Evalue 7.20e-106
ECF subfamily RNA polymerase sigma-24 factor KEGG
DB: KEGG
  • Identity: 36.0
  • Coverage: 186.0
  • Bit_score: 95
  • Evalue 2.10e-17
RNA polymerase sigma factor similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 95
  • Evalue 2.00e+00

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Taxonomy

GWB1_OD1_45_9_partial → Giovannonibacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 600
ATGGCGAGGAAACGTTACAAAAGCCTTATGGAAGGTGGTCCCGAAGCGCTAAAGGAGACGGCGGACGAGGTATTGCTCGCGGCGTCTGTCGAGTACCCGGATCTCTTTGGGGTTTTGGTTGAACGGTACCAGGCGGCGTTTTTGCGCTTCGCAGGCAGGATATTGAATTCCAAGGAGGAGGCGGAAGACGTTGTCCAGGACGCATTTTTGAAAATCTACCGGCATGCCGACCAGCTCCAGACGGGACCCAATTCAAAGTTCAAGAGCTGGGGCTATAAAATCGTATTCAACACCGCGCTTACCAAATACCGGACATTGAAAAAGCGGATGGGGGAGATGACTTATCTCGATACGTTTTTATATGAGACGCTGGGCTCGAAAGAATTTGAAGAAAATTTGGAGGCGGAGATATTGGTCAAAGAAATTTTGGAAAAGATGCCGGGCGATTTCAGGGAACTTCTCGAAATGCACTATTTAAAAGGGCTTTCGTATGAAGAGATATCCAAGCAAAAAGACATAACTATTCCCGCGCTCAAGATGAGATTATTCAGAGCTAGGGAGGTTTTCAGAAGCGTTTCGGACGGAGCTACGCAAATATAA
PROTEIN sequence
Length: 200
MARKRYKSLMEGGPEALKETADEVLLAASVEYPDLFGVLVERYQAAFLRFAGRILNSKEEAEDVVQDAFLKIYRHADQLQTGPNSKFKSWGYKIVFNTALTKYRTLKKRMGEMTYLDTFLYETLGSKEFEENLEAEILVKEILEKMPGDFRELLEMHYLKGLSYEEISKQKDITIPALKMRLFRAREVFRSVSDGATQI*