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gwa1_scaffold_574_66

Organism: GWA1_WWE3_42_12

near complete RP 40 / 55 MC: 2 BSCG 46 / 51 MC: 2 ASCG 10 / 38 MC: 1
Location: comp(57698..58873)

Top 3 Functional Annotations

Value Algorithm Source
putative RNA polymerase sigma factor; K03086 RNA polymerase primary sigma factor Tax=RIFOXYC1_FULL_WWE3_42_13_curated UNIPROT
DB: UniProtKB
  • Identity: 90.4
  • Coverage: 417.0
  • Bit_score: 714
  • Evalue 9.50e-203
hypothetical protein KEGG
DB: KEGG
  • Identity: 87.3
  • Coverage: 417.0
  • Bit_score: 695
  • Evalue 7.00e-198
RNA polymerase sigma factor similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 340
  • Evalue 5.00e+00

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Taxonomy

RIFOXYC1_FULL_WWE3_42_13_curated → WWE3 → Bacteria

Sequences

DNA sequence
Length: 1176
ATGAAAAAAAAATCTAAAGAACCAGAAGAAAAAAAAGGCAAAGGCGCAATAAGTGACGCAGTAATTTCCCGACTTGTGTCTAAAGGAAAAAAGCAAGGATTTTTAACACTGGATAATATACTTGAGTTGTTTCCACAGGCCGAAGAAGAACTTGAAACACTCGATTTCCTGTACGAGAGGTTGGTAGACGCCGGAGTCGACGTGTTCGATGTAGCTTCGGAAAAAGAGGCTGAGAAAATTCACAAGTTTGAAGACATCGACCTTACCCAAATAAAACTTGATAAGACCGTAAGTTCCGATCCTGTGAGAATGTATCTCAGAGAAATAGGTAATTACAGCCTTCTAACATCTCTTGAGGAAGTGGATTTGGCGAAAAAAGCGGAGGTAATTAGATACAAAAAGACTGTTAAGGAAATGCAGCACGCCGGGAATAAAAAACCCAGCGCAAAAGATATTTCTAAAGAGATGGGTCTTAAAGAAAAAGAAGTGAAAGAAATCGAGGCGTTCTCTCACGGTACCAACGACAGAGAAGGAGCACGTGCTCACGAAATGTTAATAAAAGCCAATACACGTCTCGTTGTTTCGATAGCCAAAAAGCATATGGGCAGGGGACTTCAATTCCTCGATCTTATACAGGAGGGAAATATGGGTCTTATGAAAGCCGTTGATAAATTCGACTGGCGCCGGGGTTTTAAATTCTCAACTTATGCAACTTGGTGGATCCGACAGGCTATCACACGAGCTATTGCAGACCAGGCCAAGACGATAAGAGTTCCCGTTCATATGGTCGAAACAATCCACAAGTACAAAAAAATTGAGCGCGAACTGGAGCAAAAATTTGAAAGAACGCCGACCCCGGAAGAAGTAGCCAAGGTTATGGGTATAGAGCCCGAGAAAGCTCACGATATTGTAAAAATTGCGCAGGATGTTACATCTCTTGAAACCCCTGTGGGAAAAGAGGAAGATACGCGACTTAAAGAGTTCATTGAGGATGAAACAACAGAAAGAAAAGTTTTGGAACTAAGGTTCGGATTAAAAGACGGGCGTACCCGCACACTTGAGGAAGTGGGAAAAGAGTTCGGTGTCACCCGCGAAAGAATACGACAAATAGAAGCCAAGGCGCTAAGAAAACTCAGACATCCTTCGAGAAGTAAACGCCTCAGAGACTACCTTTAG
PROTEIN sequence
Length: 392
MKKKSKEPEEKKGKGAISDAVISRLVSKGKKQGFLTLDNILELFPQAEEELETLDFLYERLVDAGVDVFDVASEKEAEKIHKFEDIDLTQIKLDKTVSSDPVRMYLREIGNYSLLTSLEEVDLAKKAEVIRYKKTVKEMQHAGNKKPSAKDISKEMGLKEKEVKEIEAFSHGTNDREGARAHEMLIKANTRLVVSIAKKHMGRGLQFLDLIQEGNMGLMKAVDKFDWRRGFKFSTYATWWIRQAITRAIADQAKTIRVPVHMVETIHKYKKIERELEQKFERTPTPEEVAKVMGIEPEKAHDIVKIAQDVTSLETPVGKEEDTRLKEFIEDETTERKVLELRFGLKDGRTRTLEEVGKEFGVTRERIRQIEAKALRKLRHPSRSKRLRDYL*