ggKbase home page

gwa1_scaffold_16509_8

Organism: GWA1_OD1_37_20_partial

partial RP 26 / 55 MC: 1 BSCG 30 / 51 MC: 2 ASCG 7 / 38
Location: comp(5026..6222)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor {ECO:0000313|EMBL:KKQ29719.1}; TaxID=1618729 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA1_37_20.;" UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 398.0
  • Bit_score: 779
  • Evalue 3.20e-222
RpoD subfamily RNA polymerase sigma-70 KEGG
DB: KEGG
  • Identity: 53.8
  • Coverage: 377.0
  • Bit_score: 369
  • Evalue 1.20e-99
RNA polymerase sigma factor similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 369
  • Evalue 1.00e+00

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWA1_OD1_37_20_partial → Nomurabacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1197
ATGAAGAAAAAAACAAAGAAAAAAAATAAAAAGTTTAAAGCTAAAAAGGTAAAAGTTGTAAAAAAACTACGCAAAAAACTATTAAAAAAAGTTTTTGCTAAGAGTGAAAAAAAATTATCTTCCCTAGAAAAAAAAGCGGAAAATCTAACTCGCATCTCAAATGAGCTCATAGAAAAAGGACGCAAAAGGGGATTCATCACTTATGATGAAATATTGAAAACTTTTCCAGATATTGAAAATAATATTCTATTTTTAGACGAACTCTACGAAAAATTCACAGTTGCTGGAATTGATGTGCTTGAAGGTGGAAATTTGCTTAATCTCAATACCGATCTGACTGACAAGGATTTAAACAAAGGCACGATGCATGATTCTATCCAAATGTATTTGAAGGAAATAGGTCAGTATCCGCTTATTCACGCAGGCGATGAAAAAGACCTTGCTAAGCGCATTGAGCATGGCGATCTGGAAGCAAAGAATCTGCTTGCTCGCGCGAACTTGCGTCTCGTGGTTTCAATTGCCAAAAAATATGTGGGGAGGTCCGCTAATCTGACCCTTCTTGATCTGATTCAAGAAGGCAATTTGGGCTTATTCAAGGCAGTTGAAAAATTTGATTGGACTAAGGGGTATAAATTCTCTACTTATGCAACTTGGTGGATTCGCCAGTCTATTACTCGCGCATTGGCCGACCAGTCTCGTACCATTCGTATTCCAGTACATATGGTTGAGACTATTTCTAAATATAAACAAACGCACAGGAGACTCAGTCAAGACTTGGGTCGGGAGCCGTTGGCAGAAGAAATTGCCACTGAAATGGGTATTCCAGTTGAAAAAATCCACACAATTGAAAACATTAGCCAAGAAACAGTTTCTCTAGAACAGCCGGTGGGAGACGACGACGATAAATCAACATTAGAAAATTTTATTCCGGACGATAAAATTTTGCGTCCAGACCAAGAATCTTCTCGCAGAATTCTCTCTGATCAGATTCGTGAAGTTTTAAGTGAGCTGAACCCTAAGGAACGAAAAATACTTGAAATGCGATACGGATTGCTAGATGGCATCCAGCATACTCTCGAACGAGTAGGAGAAGAATTTGGGGTAACTCGGGAACGTATTCGTCAAATTGAAGCAAAAGTTCACGAAAAACTTCGCCAGCACGAAAAAATTGCAAGGTTAAAAAATTATCTTGATTAG
PROTEIN sequence
Length: 399
MKKKTKKKNKKFKAKKVKVVKKLRKKLLKKVFAKSEKKLSSLEKKAENLTRISNELIEKGRKRGFITYDEILKTFPDIENNILFLDELYEKFTVAGIDVLEGGNLLNLNTDLTDKDLNKGTMHDSIQMYLKEIGQYPLIHAGDEKDLAKRIEHGDLEAKNLLARANLRLVVSIAKKYVGRSANLTLLDLIQEGNLGLFKAVEKFDWTKGYKFSTYATWWIRQSITRALADQSRTIRIPVHMVETISKYKQTHRRLSQDLGREPLAEEIATEMGIPVEKIHTIENISQETVSLEQPVGDDDDKSTLENFIPDDKILRPDQESSRRILSDQIREVLSELNPKERKILEMRYGLLDGIQHTLERVGEEFGVTRERIRQIEAKVHEKLRQHEKIARLKNYLD*