ggKbase home page

gwa1_scaffold_253_13

Organism: GWA1_OD1_56_13

near complete RP 42 / 55 MC: 1 BSCG 44 / 51 MC: 1 ASCG 10 / 38 MC: 1
Location: comp(12542..13120)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family protein {ECO:0000313|EMBL:KKW43162.1}; TaxID=1618803 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_56_13.;" UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 192.0
  • Bit_score: 372
  • Evalue 3.30e-100
RNA polymerase ECF-type sigma factor KEGG
DB: KEGG
  • Identity: 31.6
  • Coverage: 193.0
  • Bit_score: 80
  • Evalue 5.20e-13
RNA polymerase sigma factor, sigma-70 family protein similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 86
  • Evalue 9.00e+00

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Parcubacteria bacterium GW2011_GWA1_56_13 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 579
ATGGGTTTTTCAACTGCCGAACTAAGCCAGCTGACGGACGCCGAGGTGCTCGCGCGCTCGCAGAAGGAGCCCGATCTTTTCGCGATCCTCGTCCGCCGGTACGAAGCCGCTCTTCTGCGGAGGGCGCGCGCGATATTGAAAAGCCCCGAAGACGCGGAGGAGGCCGTGCAGGACGCGTTCACGAAGATGTACCTGTATGCGGATAGATATCACGCCCAGGAAGGGGCAACCTTCTCATCTTGGGCGTACACCATCCTCAACCGCGTTGCGTACACCAAGTATGTCGCGCGACGTAAGGAGAGCGGGCGGCGGGCGGAACTCGAACCGGAGCACTACGAGTCATTGCCGGACGCGAGTGCGGAATTCCTCGAAGACCTTTCGGTACGCAACGAGGTCATCACTGCGCTCGCGAAGCTGCCGGAATCCGCCGCCCGCATCCTCCGGCTCCAGTTCGTCGAGGGAAAGAGCCAGGAAGAGATCGCGGAAAAGGAAGATCTCTCCATCCCCGCCGTGAAAACGCGCGTCCACCGCGCCAAGAAGCTCTTCAAACGAGCGTATGATGAACAGCACTATGAATAA
PROTEIN sequence
Length: 193
MGFSTAELSQLTDAEVLARSQKEPDLFAILVRRYEAALLRRARAILKSPEDAEEAVQDAFTKMYLYADRYHAQEGATFSSWAYTILNRVAYTKYVARRKESGRRAELEPEHYESLPDASAEFLEDLSVRNEVITALAKLPESAARILRLQFVEGKSQEEIAEKEDLSIPAVKTRVHRAKKLFKRAYDEQHYE*