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gwa1_scaffold_5870_17

Organism: GWA1_OD1_42_7_partial

partial RP 29 / 55 BSCG 33 / 51 MC: 1 ASCG 7 / 38 MC: 1
Location: comp(12841..14298)

Top 3 Functional Annotations

Value Algorithm Source
RNA-metabolising metallo-beta-lactamase, ribonuclease J {ECO:0000313|EMBL:KKS91441.1}; EC=3.1.-.- {ECO:0000313|EMBL:KKS91441.1};; TaxID=1618909 species="Bacteria; Parcubacteria.;" source="Parcubacteri UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 485.0
  • Bit_score: 956
  • Evalue 1.40e-275
rnjA; ribonuclease J 1 (EC:3.1.-.-) KEGG
DB: KEGG
  • Identity: 40.0
  • Coverage: 485.0
  • Bit_score: 375
  • Evalue 2.00e-101
RNA-metabolising metallo-beta-lactamase similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 372
  • Evalue 1.00e+00

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Taxonomy

Parcubacteria bacterium GW2011_GWC1_43_12 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1458
TTGGACCATATCGGCGCGGCTCCGATTCTTTTAAGGCAGTTAAACTACCCCACCGTTGTGGGACGCGATTTGACTTTGGCCTTGGTTAAAAGAAGAATGGAAGATTTCGAGGAAGGATCGGCCAAGCGTTTGGATTATTTGAGAATCAATTCCTTGAGCGACAAATTCACTTTTGGAAACTTTAAAATCAGCTTTTTCCAGGTTGAACATTCGATTATGGACGCCGTGGGCGTGATTATGGAAACGCCGGCCGGAACCGTCATTCATCCGGGCGACTGGACGATGGATCCCAATCCGATTTCGGAAAAACCGGTTACCTACACGCATCTTGCCCAACTTCCAAGCCCCAGAATTTTGATGCTTGAAAGTTTGGGTTCCACCGACACTAGAGATAAACTGGTTTCAGAAAGAGAGATGTTCAATAACTTGGAAAAACTGATTGACGCGGCCCGCGGCAAAGTGATAGTGGGAACATTTTCTTCGCAAATTTGCCGCATCGGCTATCTCTTGGAATACGCCCAGAAAATCGGCAAAAAAGTGGCGCTGGACGGCTATAGCATGAAACTGAATGTGGAAATCGCCAAGGAATTGGGCTATATCAAAGTTCACAAAGACACTTTGATTCAGATCAAAGATATTCATAAATATCCAGACGACAAAGTGATAATAATTTGCACCGGGGCGCAGGGCGAAGGCAACGCGGTTCTTTCGCGCGTAATCAGCGGCGACCATCGATTCATAAAAATCCGCAAACAGGACACCGTGATTTTTTCTTCCTCGGTGATTCCCGGCAACGAACGCACAGTGCAAAGAATCAAAGACGAACTTTATCGCCAATGCGACAACGTGATCCATAACGAGATTATGGATGTTCACGCGAGCGGCCATTGCAATGCCAAAAGCATCCAGGAAATGCTCCGCCAGGTGAATCCGGATTATTTCATTCCGGTTTACGCCAACCATTATTTTTTGAAAGAAGCGGCGAAGTTGGCCGTCAATATCGGATTCAAAAAAGAAAACATTTTTGTTTTGGACAACGGCTCGGTTTTGGAATTTGGCCAAAACAGCCCCAAAGTTTTAAGCAAAAAAGTTGATACCAGCTATGTCTTTATCGACGGCTTGGGCATCGGCGACGTGGGACAAGTCGTTCTGCGCGACCGCCAAGCGATGGCCAAAGACGGAATGTTTGTGATTATTGTCACATTGGATTCCAAAAACGGAAAAATTCTTTCCAGTCCCGATATCATCTCGCGCGGATTCATCTATATGCGAGAATCGAAAGAATTGCTTTACCAAGTGCGCGAAAAAGTCAAAGAAATAGTGAGCCGCTCCACCGGCGCGGAAAACCCCATCAACGCCAATTACATCAAAGAAAACATCCGCGACAAAATAGGTCAATTCCTGTATACAAAGACTGAAAGACGGCCGATGGTGTTACCAGTCGTAATCGAAGTCTAG
PROTEIN sequence
Length: 486
LDHIGAAPILLRQLNYPTVVGRDLTLALVKRRMEDFEEGSAKRLDYLRINSLSDKFTFGNFKISFFQVEHSIMDAVGVIMETPAGTVIHPGDWTMDPNPISEKPVTYTHLAQLPSPRILMLESLGSTDTRDKLVSEREMFNNLEKLIDAARGKVIVGTFSSQICRIGYLLEYAQKIGKKVALDGYSMKLNVEIAKELGYIKVHKDTLIQIKDIHKYPDDKVIIICTGAQGEGNAVLSRVISGDHRFIKIRKQDTVIFSSSVIPGNERTVQRIKDELYRQCDNVIHNEIMDVHASGHCNAKSIQEMLRQVNPDYFIPVYANHYFLKEAAKLAVNIGFKKENIFVLDNGSVLEFGQNSPKVLSKKVDTSYVFIDGLGIGDVGQVVLRDRQAMAKDGMFVIIVTLDSKNGKILSSPDIISRGFIYMRESKELLYQVREKVKEIVSRSTGAENPINANYIKENIRDKIGQFLYTKTERRPMVLPVVIEV*