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gwa1_scaffold_135_4

Organism: GWA1_OD1_44_29

partial RP 37 / 55 BSCG 40 / 51 MC: 1 ASCG 10 / 38
Location: 2977..3897

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor {ECO:0000313|EMBL:KKT57126.1}; TaxID=1618652 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_44_23.;" UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 306.0
  • Bit_score: 596
  • Evalue 1.70e-167
RpoD subfamily RNA polymerase sigma-70 subunit KEGG
DB: KEGG
  • Identity: 43.3
  • Coverage: 298.0
  • Bit_score: 223
  • Evalue 6.10e-56
RNA polymerase sigma factor similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 223
  • Evalue 7.00e+00

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Taxonomy

Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_44_23 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 921
ATGGAAGAACGAGAAAGCGAAGAAATGGAAGAAAACAATGTGCCGAAAAGAAAAAGTTCGATTGGTGTTTATTTGCGCGAAATCGGACGGACGCCTCTGCTAAGCAGAGAAGAAGAGGTTGCCGCGTTTATTAAGCTGGAAGAAGCGAAAAACGATTTTGCTCTAGCCACTAAAATTCGGGACAGCATAATAAAGGCCAACCTGCGCTTAGTGGTTAATATCGCCAAACATTATCCGAGAACGCCTTCGATGAGTTTGCTGGATTTAATACAAGAAGGCAATTTTGCGCTAATGAGGGCTATTAGCAAGTTTGATTATAGGCGAGGCAACAAACTTAGCACGTACGCCGGACCGTGGATCAGGGCGTGGATTGCGCGAGCTTTAATTGACCAGGGATGCGTCATCAGGGTTCCTGTAGGCCAGGCTGAAAAGATTAAAGCAATTTATCGCGCCTTTGGTGTTTTAGCACAAAAAAATGGCCGTAAGCCGACAATGGAAGAGCTTGTCGAAAAGCTCCAATTGCCGATGGAAACGGTTGTTGATATGTTGGCTACGGTGAAAGAACCAATCAGCCTGAATGCCAAAGCTGGAAATGATGAAGTCTCCGAAGTAGGCGATTTCGTGGTAGATGAAACAGCGCCTGCGCCCGGATTTTTAGCGGAAGAAAGCCAGATGCGGGAGTTGGTGAATCGCGGGTTGGATGGGCTGAAGCCGCTACGCGACGCAGTTATTTTGAAGATGCGCTCCGGAATCGGATATGCCCATGACTATACTCTAGAAGAAATTGGGAAGCATTTTGGCATAACGCGCGAACGGGTCAGGCAGGTGGAAGAAAAAATGAAAAAAAAGCTGAGGCGCTTCTTACGTCGCGAAAAGCTTCGTCTAAAAGCGAAATTTACGAGCAACCCACAGAAAACTTGA
PROTEIN sequence
Length: 307
MEERESEEMEENNVPKRKSSIGVYLREIGRTPLLSREEEVAAFIKLEEAKNDFALATKIRDSIIKANLRLVVNIAKHYPRTPSMSLLDLIQEGNFALMRAISKFDYRRGNKLSTYAGPWIRAWIARALIDQGCVIRVPVGQAEKIKAIYRAFGVLAQKNGRKPTMEELVEKLQLPMETVVDMLATVKEPISLNAKAGNDEVSEVGDFVVDETAPAPGFLAEESQMRELVNRGLDGLKPLRDAVILKMRSGIGYAHDYTLEEIGKHFGITRERVRQVEEKMKKKLRRFLRREKLRLKAKFTSNPQKT*